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The map label for this gene is ynaI [C]

Identifier: 15669330

GI number: 15669330

Start: 1082519

End: 1083604

Strand: Direct

Name: ynaI [C]

Synonym: MJ1143

Alternate gene names: 15669330

Gene position: 1082519-1083604 (Clockwise)

Preceding gene: 15669329

Following gene: 15669334

Centisome position: 65.02

GC content: 29.47

Gene sequence:

>1086_bases
ATGACAATAACTCAAATGATAAGTGAGATTTTAATGCACAATACTGTATATAATTATATTCTGTCTCTAATCTCAATTAT
TTTATTTATTGTTATTGGGAAATATGCAAATGCACTTATCGAAAGACTTGCAGATAAATTGCATAAAAAGAGCGGTATAG
AATTGGATGAACTTCTAATTAGGGCTTTATCTCTACCTGTAGCAATAGCAATAATATTATCTGGATTTTACTTTGGAGTA
AATTTTCTGTATCTTCTCCCCTCATTAAAAACAGCAGTAAATGAAGGGATTTTAACTGCCTTTATATTGTGTGTTGTTGT
ATTTTTTGACAGATTTCTTAATGAACTTGTAGAAAGGTATTTAGCCCTAACAATATCAAAAAAGACAAAAAAAGATGTTG
ATGACCAAATTGTTGTTTTAACCAAAAAGCTCGTTAGATTAGTTGTGTGGGTTGTTGGATTGTTGTTAATTTTGAGCAAT
CTTGGGTATGATATAAAAACTTTACTTGCTGGTTTGGGTATTGGTGGTTTAGCTGTGGCTTTAGCGTCTCAAAATCTTGT
TTCTAATTTAATCGCTGGTTTGATAATTTTAACTGATAAACCATTTAAGATTGGAAATTGGATAACTTTCAGTGGTGGTA
GTGGAATTGTTGAAGATATTGGAATAAGAAGCACAAAGATAAGGGCAACAGACAACTCAATAATCGTAGTTCCAAACTCA
AAACTTATAGATGAAATTATTCAAAATGTTCCATCTAAAAATAAGTGGAAGGTTTCAACAACTATAGGAGTAACTTATAA
TACACCAGTTGAAAAAATAAGGAAGGCAGAGGAAATTATAAAAAATATCCTCTTAGAACATCCAAATGTAGAGGATGAAC
CAATAACAGTTTATTTTAAGGAATTTGGAGATTGGAGTCTAAATATCCAAGTAGTTTATTATATTAAAAACAGCAGATAT
AATGGTTATCAAAAGTATATTAGCACGATAAATGAAGTTAATTTGAAAATAAAAGAGGAATTTGATAGAAAAGGAATTGA
ATTTGCATTCCCAACTTATACATTATATTTAAAAAGAGACGATTAA

Upstream 100 bases:

>100_bases
ATTGTATGGTGAAGAGGAGAAAGAAGAACAAAAAATAGAGCAAAAGGTTGGCCAATAAATTATTTTTAATTTTTAATTTT
TCTTTTTAACTGAGGGTATA

Downstream 100 bases:

>100_bases
AGATTTTCAGTAGCTATTGCTACAGTAACCCCATTTCTCTTAAACTTTTTTAATATCAATTTTATGCTATCAAAATCTTT
ATTTGTTAATTTTTTGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTITQMISEILMHNTVYNYILSLISIILFIVIGKYANALIERLADKLHKKSGIELDELLIRALSLPVAIAIILSGFYFGV
NFLYLLPSLKTAVNEGILTAFILCVVVFFDRFLNELVERYLALTISKKTKKDVDDQIVVLTKKLVRLVVWVVGLLLILSN
LGYDIKTLLAGLGIGGLAVALASQNLVSNLIAGLIILTDKPFKIGNWITFSGGSGIVEDIGIRSTKIRATDNSIIVVPNS
KLIDEIIQNVPSKNKWKVSTTIGVTYNTPVEKIRKAEEIIKNILLEHPNVEDEPITVYFKEFGDWSLNIQVVYYIKNSRY
NGYQKYISTINEVNLKIKEEFDRKGIEFAFPTYTLYLKRDD

Sequences:

>Translated_361_residues
MTITQMISEILMHNTVYNYILSLISIILFIVIGKYANALIERLADKLHKKSGIELDELLIRALSLPVAIAIILSGFYFGV
NFLYLLPSLKTAVNEGILTAFILCVVVFFDRFLNELVERYLALTISKKTKKDVDDQIVVLTKKLVRLVVWVVGLLLILSN
LGYDIKTLLAGLGIGGLAVALASQNLVSNLIAGLIILTDKPFKIGNWITFSGGSGIVEDIGIRSTKIRATDNSIIVVPNS
KLIDEIIQNVPSKNKWKVSTTIGVTYNTPVEKIRKAEEIIKNILLEHPNVEDEPITVYFKEFGDWSLNIQVVYYIKNSRY
NGYQKYISTINEVNLKIKEEFDRKGIEFAFPTYTLYLKRDD
>Mature_360_residues
TITQMISEILMHNTVYNYILSLISIILFIVIGKYANALIERLADKLHKKSGIELDELLIRALSLPVAIAIILSGFYFGVN
FLYLLPSLKTAVNEGILTAFILCVVVFFDRFLNELVERYLALTISKKTKKDVDDQIVVLTKKLVRLVVWVVGLLLILSNL
GYDIKTLLAGLGIGGLAVALASQNLVSNLIAGLIILTDKPFKIGNWITFSGGSGIVEDIGIRSTKIRATDNSIIVVPNSK
LIDEIIQNVPSKNKWKVSTTIGVTYNTPVEKIRKAEEIIKNILLEHPNVEDEPITVYFKEFGDWSLNIQVVYYIKNSRYN
GYQKYISTINEVNLKIKEEFDRKGIEFAFPTYTLYLKRDD

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family

Homologues:

Organism=Escherichia coli, GI1787591, Length=234, Percent_Identity=32.4786324786325, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1789291, Length=260, Percent_Identity=31.1538461538462, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1786670, Length=228, Percent_Identity=27.1929824561404, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI2367355, Length=230, Percent_Identity=29.1304347826087, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1143_METJA (Q58543)

Other databases:

- EMBL:   L77117
- PIR:   F64442
- RefSeq:   NP_248135.1
- ProteinModelPortal:   Q58543
- SMR:   Q58543
- GeneID:   1452039
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1143
- NMPDR:   fig|243232.1.peg.1172
- TIGR:   MJ1143
- HOGENOM:   HBG539016
- OMA:   EDIGWRL
- ProtClustDB:   CLSK876099
- BioCyc:   MJAN243232:MJ_1143-MONOMER
- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014

Pfam domain/function: PF00924 MS_channel; SSF82689 MscC_channel_C; SSF82861 MscS_transmembr; SSF50182 Sm_like_riboprot

EC number: NA

Molecular weight: Translated: 40684; Mature: 40552

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS01246 UPF0003; PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe1486dc)-; HASH(0xdcb09f4)-; HASH(0xe2b34d8)-; HASH(0xdd500dc)-; HASH(0xe32a624)-; HASH(0xe3457b8)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITQMISEILMHNTVYNYILSLISIILFIVIGKYANALIERLADKLHKKSGIELDELLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RALSLPVAIAIILSGFYFGVNFLYLLPSLKTAVNEGILTAFILCVVVFFDRFLNELVERY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LALTISKKTKKDVDDQIVVLTKKLVRLVVWVVGLLLILSNLGYDIKTLLAGLGIGGLAVA
HHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
LASQNLVSNLIAGLIILTDKPFKIGNWITFSGGSGIVEDIGIRSTKIRATDNSIIVVPNS
HHHHHHHHHHHHHEEEECCCCEEECCEEEECCCCCCHHHCCCCCEEEEECCCEEEEECCH
KLIDEIIQNVPSKNKWKVSTTIGVTYNTPVEKIRKAEEIIKNILLEHPNVEDEPITVYFK
HHHHHHHHHCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
EFGDWSLNIQVVYYIKNSRYNGYQKYISTINEVNLKIKEEFDRKGIEFAFPTYTLYLKRD
CCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHCCCCCEEECCEEEEEEEEC
D
H
>Mature Secondary Structure 
TITQMISEILMHNTVYNYILSLISIILFIVIGKYANALIERLADKLHKKSGIELDELLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RALSLPVAIAIILSGFYFGVNFLYLLPSLKTAVNEGILTAFILCVVVFFDRFLNELVERY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LALTISKKTKKDVDDQIVVLTKKLVRLVVWVVGLLLILSNLGYDIKTLLAGLGIGGLAVA
HHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
LASQNLVSNLIAGLIILTDKPFKIGNWITFSGGSGIVEDIGIRSTKIRATDNSIIVVPNS
HHHHHHHHHHHHHEEEECCCCEEECCEEEECCCCCCHHHCCCCCEEEEECCCEEEEECCH
KLIDEIIQNVPSKNKWKVSTTIGVTYNTPVEKIRKAEEIIKNILLEHPNVEDEPITVYFK
HHHHHHHHHCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
EFGDWSLNIQVVYYIKNSRYNGYQKYISTINEVNLKIKEEFDRKGIEFAFPTYTLYLKRD
CCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHCCCCCEEECCEEEEEEEEC
D
H

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087