| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669334
Identifier: 15669334
GI number: 15669334
Start: 1086398
End: 1087786
Strand: Direct
Name: 15669334
Synonym: MJ1147
Alternate gene names: NA
Gene position: 1086398-1087786 (Clockwise)
Preceding gene: 15669330
Following gene: 15669337
Centisome position: 65.25
GC content: 24.91
Gene sequence:
>1389_bases TTGTTTATTTTAATAATAAAATGTGGGATTATGGAAAAGGAGGTTATAAGCAGTAGGGAGTTTATTGATAGATTTGTTGA ATGTTTGGAGAAGGGAGAGGATTTTAAGTTAAAGGATTGTGTTGTTGAGGGGAATGTTGATATTTTGAATATTTATGAAA TGATTAAGGATAAAGAACTAAAAGGAGGTTATATTGAAAAAAAAGATGATGAAATTGTTGTGAATATAAATATAAAAGTT GATATTTATAATGTTGAATTTAATGGTGATTTTAGATTTTTTGTAAATATGGAATATCAAATTGTGATATCCGTTTTTAA TGGAAATGCTTATTTTAGAGTCATAACTTTTAAAGGAAGTGTTTATTTTATAAGAACAATTTTTAATGGAGATGTTGATT TTATAGACACAATTTTTGAAGAAAATGCTTATTTTAGTGTCACCGCTTTTAAAGGGAATATTATTAATTTTAGTGGCACA ATTTTTAATAAAGAATCTCATTTTAAAAGTACAACTTTTGAAGGAAATACTTATTTTAGTGTCACAACTTTTAATATAGC AGAATTTTATAATTCAACATTTAAATCTCATGTATATTTTGATGATATATCATTTAATTTGTTGTCTTTTACTGATTGTA GATTTAGAGATGATGTATCATTTAAAAAAATAGATAAAGAAAATTTTAAAGGTTTAGCAATATTCCTTAAAACTCAATTT CTAAACAAACACACAACGATAGAAAACTTCCAATTATCAAAAACATCATTTTTAAAAACAGATGTTAGAGAAGTGCTATT ATGTGATGTTAAAAAAGAAGAAATTTTAAGTCATAAAATTTTAAGAATAAAAGAAGATAGTGGTAATAAAGATAAAGATT TAGAAAATAAACTAAAAGAATTATTAGGTTTGAGTTATAAGTATATTATAGACCAATTCAATTATAAATCAGTCCTTGCA GAATACAGAAATCTAAGAATATCCATTGAGAATAACAGAACCTACATTGAAGCATCCAACCTATACAAAATGGAAATGGA ATTAATAAAAGAGTTTTCCAATGGCAGATTTGAAAAATTCATCATTGGGGCTTATGGAGCAATATCTGACTATGGAGAAT CAATGGAAAAAACAGGTAAATGGATATTAGGCAGTATGATATTATTTACAATTTTAGCATCAATTTTAAGATTTAAAGGA ATGGAATGGGATATTTTTAAAATAATAGAATTTTGGTGGATTTCATTTTGGGAAGTTATAAGGTTATTTTTACAGATAGG AACGGAAGATAAATCATTATGGATATTAGAGCCAATTATAAGGGTTACATCTCTAATTTTATTGGGTAATCTCTATATAG CTGTTAGAAGAAAATTAAGTAGAAAATAA
Upstream 100 bases:
>100_bases AACCATATCCATTTATCAATACTTTTGCTGGCATAGATTCACCATTTGAAATTTTTGTAGGATTAATAATAATTACTTTG GCAATATATATTTTTATAAT
Downstream 100 bases:
>100_bases ATTAATCATACTCTCTCCATGTATGACCGCATTTCTTACACTTATAGAATCTTGTTTCTGGTTCATCAGCACATCTTGTT TGTTGTAGCCACCAGTAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MFILIIKCGIMEKEVISSREFIDRFVECLEKGEDFKLKDCVVEGNVDILNIYEMIKDKELKGGYIEKKDDEIVVNINIKV DIYNVEFNGDFRFFVNMEYQIVISVFNGNAYFRVITFKGSVYFIRTIFNGDVDFIDTIFEENAYFSVTAFKGNIINFSGT IFNKESHFKSTTFEGNTYFSVTTFNIAEFYNSTFKSHVYFDDISFNLLSFTDCRFRDDVSFKKIDKENFKGLAIFLKTQF LNKHTTIENFQLSKTSFLKTDVREVLLCDVKKEEILSHKILRIKEDSGNKDKDLENKLKELLGLSYKYIIDQFNYKSVLA EYRNLRISIENNRTYIEASNLYKMEMELIKEFSNGRFEKFIIGAYGAISDYGESMEKTGKWILGSMILFTILASILRFKG MEWDIFKIIEFWWISFWEVIRLFLQIGTEDKSLWILEPIIRVTSLILLGNLYIAVRRKLSRK
Sequences:
>Translated_462_residues MFILIIKCGIMEKEVISSREFIDRFVECLEKGEDFKLKDCVVEGNVDILNIYEMIKDKELKGGYIEKKDDEIVVNINIKV DIYNVEFNGDFRFFVNMEYQIVISVFNGNAYFRVITFKGSVYFIRTIFNGDVDFIDTIFEENAYFSVTAFKGNIINFSGT IFNKESHFKSTTFEGNTYFSVTTFNIAEFYNSTFKSHVYFDDISFNLLSFTDCRFRDDVSFKKIDKENFKGLAIFLKTQF LNKHTTIENFQLSKTSFLKTDVREVLLCDVKKEEILSHKILRIKEDSGNKDKDLENKLKELLGLSYKYIIDQFNYKSVLA EYRNLRISIENNRTYIEASNLYKMEMELIKEFSNGRFEKFIIGAYGAISDYGESMEKTGKWILGSMILFTILASILRFKG MEWDIFKIIEFWWISFWEVIRLFLQIGTEDKSLWILEPIIRVTSLILLGNLYIAVRRKLSRK >Mature_462_residues MFILIIKCGIMEKEVISSREFIDRFVECLEKGEDFKLKDCVVEGNVDILNIYEMIKDKELKGGYIEKKDDEIVVNINIKV DIYNVEFNGDFRFFVNMEYQIVISVFNGNAYFRVITFKGSVYFIRTIFNGDVDFIDTIFEENAYFSVTAFKGNIINFSGT IFNKESHFKSTTFEGNTYFSVTTFNIAEFYNSTFKSHVYFDDISFNLLSFTDCRFRDDVSFKKIDKENFKGLAIFLKTQF LNKHTTIENFQLSKTSFLKTDVREVLLCDVKKEEILSHKILRIKEDSGNKDKDLENKLKELLGLSYKYIIDQFNYKSVLA EYRNLRISIENNRTYIEASNLYKMEMELIKEFSNGRFEKFIIGAYGAISDYGESMEKTGKWILGSMILFTILASILRFKG MEWDIFKIIEFWWISFWEVIRLFLQIGTEDKSLWILEPIIRVTSLILLGNLYIAVRRKLSRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1147_METJA (Q58547)
Other databases:
- EMBL: L77117 - PIR: B64443 - RefSeq: NP_248139.1 - ProteinModelPortal: Q58547 - GeneID: 1452043 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1147 - NMPDR: fig|243232.1.peg.1176 - TIGR: MJ1147 - OMA: NLYKMEM - ProtClustDB: CLSK796754 - BioCyc: MJAN243232:MJ_1147-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54434; Mature: 54434
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe345a1c)-; HASH(0xe23fb18)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFILIIKCGIMEKEVISSREFIDRFVECLEKGEDFKLKDCVVEGNVDILNIYEMIKDKEL CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHCCCCC KGGYIEKKDDEIVVNINIKVDIYNVEFNGDFRFFVNMEYQIVISVFNGNAYFRVITFKGS CCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEECCCEEEEEEEEECC VYFIRTIFNGDVDFIDTIFEENAYFSVTAFKGNIINFSGTIFNKESHFKSTTFEGNTYFS EEEEEEEECCCHHHHHHHHCCCCEEEEEEEECCEEEEECEEECCCCCCCCEEECCCEEEE VTTFNIAEFYNSTFKSHVYFDDISFNLLSFTDCRFRDDVSFKKIDKENFKGLAIFLKTQF EEEEEHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCCCCHHHCCCCCCCEEEEEEEEHH LNKHTTIENFQLSKTSFLKTDVREVLLCDVKKEEILSHKILRIKEDSGNKDKDLENKLKE CCCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHH LLGLSYKYIIDQFNYKSVLAEYRNLRISIENNRTYIEASNLYKMEMELIKEFSNGRFEKF HHCCCEEHHHHCCCHHHHHHHHHCEEEEEECCEEEEEECCCHHHHHHHHHHHCCCCEEEE IIGAYGAISDYGESMEKTGKWILGSMILFTILASILRFKGMEWDIFKIIEFWWISFWEVI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RLFLQIGTEDKSLWILEPIIRVTSLILLGNLYIAVRRKLSRK HHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MFILIIKCGIMEKEVISSREFIDRFVECLEKGEDFKLKDCVVEGNVDILNIYEMIKDKEL CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHCCCCC KGGYIEKKDDEIVVNINIKVDIYNVEFNGDFRFFVNMEYQIVISVFNGNAYFRVITFKGS CCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEECCCEEEEEEEEECC VYFIRTIFNGDVDFIDTIFEENAYFSVTAFKGNIINFSGTIFNKESHFKSTTFEGNTYFS EEEEEEEECCCHHHHHHHHCCCCEEEEEEEECCEEEEECEEECCCCCCCCEEECCCEEEE VTTFNIAEFYNSTFKSHVYFDDISFNLLSFTDCRFRDDVSFKKIDKENFKGLAIFLKTQF EEEEEHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCCCCHHHCCCCCCCEEEEEEEEHH LNKHTTIENFQLSKTSFLKTDVREVLLCDVKKEEILSHKILRIKEDSGNKDKDLENKLKE CCCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHH LLGLSYKYIIDQFNYKSVLAEYRNLRISIENNRTYIEASNLYKMEMELIKEFSNGRFEKF HHCCCEEHHHHCCCHHHHHHHHHCEEEEEECCEEEEEECCCHHHHHHHHHHHCCCCEEEE IIGAYGAISDYGESMEKTGKWILGSMILFTILASILRFKGMEWDIFKIIEFWWISFWEVI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RLFLQIGTEDKSLWILEPIIRVTSLILLGNLYIAVRRKLSRK HHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087