| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669104
Identifier: 15669104
GI number: 15669104
Start: 845779
End: 846189
Strand: Reverse
Name: 15669104
Synonym: MJ0914
Alternate gene names: NA
Gene position: 846189-845779 (Counterclockwise)
Preceding gene: 15669105
Following gene: 15669103
Centisome position: 50.82
GC content: 26.52
Gene sequence:
>411_bases GTGAAAATATTGAAGAAATTGAAGAAGAAATTAGAAAAAGAAGAGAGTAAAATATTGGTCGATACTTCAGTTTTAATTGA TTATTTTAAAAAAAGAAGATTGGAAGAACTCGGAGGAGAAGCGATTTCAATAATAACAGCAGTCGAATTTATTAGAGGTA TTTCAGAACACAAACAAGAACAAGTTCTAAATATTTTTAAAGAGTTGTTTGAGATTGTTTATATTGATGAAGAGATAATT ATACCATTTTCAAAAATTTACCGACAATTAAAAAAGAGAGGTATGCTAATAGACGATGCTGACTTATATATTGCATGCAC CGCAATAATCAAAAATTATCCATTATGGACTAAAAACAAAAAACATTTTGAGAGATTAAAAGAATTTGGTTTAAAAATAT ATGATAAGTGA
Upstream 100 bases:
>100_bases GAAATTCCAGAAGATATTGATGCTAAAAAATTCAAAGATGATGTTAAAAGATATGTTAGATATAAATTACTTGCTAACAA ACTCTATGAATTATTAGAAG
Downstream 100 bases:
>100_bases AATCATGCACCCAACTAAATTATTAAAAGGAACTAAATCAAAGCTCTTAGAGAATAAAAAAATCTTAGTTGCTGTAACTT CATCAATAGCGGCTATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKILKKLKKKLEKEESKILVDTSVLIDYFKKRRLEELGGEAISIITAVEFIRGISEHKQEQVLNIFKELFEIVYIDEEII IPFSKIYRQLKKRGMLIDDADLYIACTAIIKNYPLWTKNKKHFERLKEFGLKIYDK
Sequences:
>Translated_136_residues MKILKKLKKKLEKEESKILVDTSVLIDYFKKRRLEELGGEAISIITAVEFIRGISEHKQEQVLNIFKELFEIVYIDEEII IPFSKIYRQLKKRGMLIDDADLYIACTAIIKNYPLWTKNKKHFERLKEFGLKIYDK >Mature_136_residues MKILKKLKKKLEKEESKILVDTSVLIDYFKKRRLEELGGEAISIITAVEFIRGISEHKQEQVLNIFKELFEIVYIDEEII IPFSKIYRQLKKRGMLIDDADLYIACTAIIKNYPLWTKNKKHFERLKEFGLKIYDK
Specific function: Unknown
COG id: COG1487
COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y914_METJA (Q58324)
Other databases:
- EMBL: L77117 - PIR: B64414 - RefSeq: NP_247909.1 - ProteinModelPortal: Q58324 - SMR: Q58324 - GeneID: 1451803 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0914 - NMPDR: fig|243232.1.peg.946 - TIGR: MJ0914 - HOGENOM: HBG705734 - OMA: GSICIAN - ProtClustDB: CLSK2749930 - BioCyc: MJAN243232:MJ_0914-MONOMER - InterPro: IPR002716
Pfam domain/function: PF01850 PIN
EC number: NA
Molecular weight: Translated: 16211; Mature: 16211
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILKKLKKKLEKEESKILVDTSVLIDYFKKRRLEELGGEAISIITAVEFIRGISEHKQE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QVLNIFKELFEIVYIDEEIIIPFSKIYRQLKKRGMLIDDADLYIACTAIIKNYPLWTKNK HHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCH KHFERLKEFGLKIYDK HHHHHHHHCCCHHCCC >Mature Secondary Structure MKILKKLKKKLEKEESKILVDTSVLIDYFKKRRLEELGGEAISIITAVEFIRGISEHKQE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QVLNIFKELFEIVYIDEEIIIPFSKIYRQLKKRGMLIDDADLYIACTAIIKNYPLWTKNK HHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCH KHFERLKEFGLKIYDK HHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087