| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668551
Identifier: 15668551
GI number: 15668551
Start: 339917
End: 340681
Strand: Direct
Name: 15668551
Synonym: MJ0375
Alternate gene names: NA
Gene position: 339917-340681 (Clockwise)
Preceding gene: 15668549
Following gene: 15668552
Centisome position: 20.42
GC content: 29.02
Gene sequence:
>765_bases ATGAGGGAGAGTATGAGAATTGAGTTAGAGTTACAGACAGACAACTTCACAGTAATTCCTTATAATCATCAGTATTATTT GGCATCAGCCATATACAATAAAATTCACTCTGCAAATCCTGCCTATGCTAAAAGATTACATAATTATCAGAAGTTTAAGT TCTTTACTTTTTCTTTATTGCAGATTAGAAAGAGGGTTATTAGAAAGGAAGGGATTGAAACTATAGATGGGAAGGCATAT CTCTATATATCCTCACCAAACAATGAGTTTATTGAGAATTTTGTTGCTGGACTCTTAGAGGATGGAAAGTTGAGAGTAGG AAATGTTGAATTCTTTGTAAGAAAGGCTAAAATTCTACCAATTCCAAAGAAATTCAATATATTAAAAACCATATCTCCAA TTTACTTAAAGACGATGATTGAGACAGAAGATGGTTTAAAAACTTATGATTTATTACCAAACAATTCTAAATTTTATGAA AACTTAAAGAATAATCTAAAAAAGAAATATGAAGCATTCTATAATGAAAAATGTGACATGAACTTTGAATTTGAAGTCTT AAAATTTAGACCTAAAAGGATGAGAATAAAAAATGATATTTATTGTAGGTGTTCTGAAATGGTGTTTAAGGTCTGGGGGG ACTACGATTTAATAAAATTTGGTTATGAGTGTGGTTTTGGAGAGAAGAATAGTATGGGTTTTGGAATGGTTGTAAATGTT GAAGATAAAAATCAAAAAAATAAAAAACTCAAAACAAAAATTTAA
Upstream 100 bases:
>100_bases ATTTACAAGATATTCAGCCATAGCGTATAAATCCATATAACCACCAGATATCATTAATTTCCTAAGGTTAATAAAGTGTT ATTGTTTATTTAAATATTTT
Downstream 100 bases:
>100_bases TTGTGGCTAATAATTGTTAATATCTCCTATTTACTTTTTCATTATTGCATAAAAACGTGTTAAACAAAATCATTTATTAA TCATACTACATAACTCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLLQIRKRVIRKEGIETIDGKAY LYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILPIPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYE NLKNNLKKKYEAFYNEKCDMNFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV EDKNQKNKKLKTKI
Sequences:
>Translated_254_residues MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLLQIRKRVIRKEGIETIDGKAY LYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILPIPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYE NLKNNLKKKYEAFYNEKCDMNFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV EDKNQKNKKLKTKI >Mature_254_residues MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLLQIRKRVIRKEGIETIDGKAY LYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILPIPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYE NLKNNLKKKYEAFYNEKCDMNFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV EDKNQKNKKLKTKI
Specific function: Unknown
COG id: COG1583
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y375_METJA (Q57820)
Other databases:
- EMBL: L77117 - PIR: G64346 - RefSeq: NP_247349.1 - GeneID: 1451232 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0375 - NMPDR: fig|243232.1.peg.386 - TIGR: MJ0375 - HOGENOM: HBG645581 - OMA: NSQGFGL - ProtClustDB: CLSK2517601 - BioCyc: MJAN243232:MJ_0375-MONOMER - InterPro: IPR010156 - InterPro: IPR002743 - TIGRFAMs: TIGR01877
Pfam domain/function: PF01881 DUF57
EC number: NA
Molecular weight: Translated: 30185; Mature: 30185
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLL CCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH QIRKRVIRKEGIETIDGKAYLYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILP HHHHHHHHHCCCCEECCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEEC IPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYENLKNNLKKKYEAFYNEKCDM CCCCCCHHHHCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC NFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV CEEEEEEEECCHHHCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEE EDKNQKNKKLKTKI CCCCCCCCCCCCCC >Mature Secondary Structure MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLL CCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH QIRKRVIRKEGIETIDGKAYLYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILP HHHHHHHHHCCCCEECCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEEC IPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYENLKNNLKKKYEAFYNEKCDM CCCCCCHHHHCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC NFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV CEEEEEEEECCHHHCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEE EDKNQKNKKLKTKI CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087