| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668408
Identifier: 15668408
GI number: 15668408
Start: 224278
End: 225111
Strand: Direct
Name: 15668408
Synonym: MJ0233
Alternate gene names: NA
Gene position: 224278-225111 (Clockwise)
Preceding gene: 15668403
Following gene: 15668409
Centisome position: 13.47
GC content: 26.26
Gene sequence:
>834_bases ATGGGAACTATTGAGAGTTATTTAACGAACTCATATAACTATATTATCTTTAACTTTAAAAAGTTATGTATTGGGGGCTT AATGAGTGCCATAGTTGGAGCAATGAGTGGAGTCACTACTGCATTTATTGATTTATTTATGGAAAGGGCTAATTATGACA TTATGCATATTATAATGTCATTTTTAATTTATTTTGGGATAATTTTTATCATTGGGCTAATTGTTTCTGCTATTATAGGA GGATACAATGTGAGAATTATGAAGACTACTGTTGAAGGATTAAATGTAGCTCCTGATTGGAATAACATTACTGATTTGCT GTATAGGGGAATACTATATATTGTTGGGTTAGTTTTATTAAATATTATATTTTACTTTATCCCAGCAATTTTATTTGTTT TTGGAATATTTTCACTATACATTAGCAAAATTATTGGGGCTTTCCTTATTATAATCTCAATACTAATTTTTATAATTTCA GTAATTAGTTTATGGCTTTATTCTAAGTTGGCAGAGGTTAATTATTCAGTTAAAGGATTTTATGGATTCTTTGAATTTAA AGAAATATTTAAGATGATTGGGATAAGATACATAATCTTAGTGATTATCATAGCAATTATTAATTTTATAATAAGTCTAA TAGTTGTTTTACCACTTAATATTATTGATATATTTATCTCATATTCAGCATTAGCTAACAGTATTTTAACAATAATTTAT ATATCAATAAAGGGAATATCTTACGCATTATCAACATTTGTTGATTTCTATTTAGGTGTGTTTTCAATAAGGGCAGTTGC ATTATACTATAAAGATAGAAAGGGGATAACATGA
Upstream 100 bases:
>100_bases TCAAATCTCTCATCCATATTATATAACAAATTATCACCTAATAGATATTTTTAAATACTTTAATTATGAATTTTTATAAT AAACTTGGAGGTGAAGTTAT
Downstream 100 bases:
>100_bases TAACTGAGGCATTAAAAAAGGTTATTGAATTTAAGGATTTAGATGAAAAAGAGGCAGAGGCTGTTATGAAAGACATCATG AGTGGAAATGCAAAACCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGTIESYLTNSYNYIIFNFKKLCIGGLMSAIVGAMSGVTTAFIDLFMERANYDIMHIIMSFLIYFGIIFIIGLIVSAIIG GYNVRIMKTTVEGLNVAPDWNNITDLLYRGILYIVGLVLLNIIFYFIPAILFVFGIFSLYISKIIGAFLIIISILIFIIS VISLWLYSKLAEVNYSVKGFYGFFEFKEIFKMIGIRYIILVIIIAIINFIISLIVVLPLNIIDIFISYSALANSILTIIY ISIKGISYALSTFVDFYLGVFSIRAVALYYKDRKGIT
Sequences:
>Translated_277_residues MGTIESYLTNSYNYIIFNFKKLCIGGLMSAIVGAMSGVTTAFIDLFMERANYDIMHIIMSFLIYFGIIFIIGLIVSAIIG GYNVRIMKTTVEGLNVAPDWNNITDLLYRGILYIVGLVLLNIIFYFIPAILFVFGIFSLYISKIIGAFLIIISILIFIIS VISLWLYSKLAEVNYSVKGFYGFFEFKEIFKMIGIRYIILVIIIAIINFIISLIVVLPLNIIDIFISYSALANSILTIIY ISIKGISYALSTFVDFYLGVFSIRAVALYYKDRKGIT >Mature_276_residues GTIESYLTNSYNYIIFNFKKLCIGGLMSAIVGAMSGVTTAFIDLFMERANYDIMHIIMSFLIYFGIIFIIGLIVSAIIGG YNVRIMKTTVEGLNVAPDWNNITDLLYRGILYIVGLVLLNIIFYFIPAILFVFGIFSLYISKIIGAFLIIISILIFIISV ISLWLYSKLAEVNYSVKGFYGFFEFKEIFKMIGIRYIILVIIIAIINFIISLIVVLPLNIIDIFISYSALANSILTIIYI SIKGISYALSTFVDFYLGVFSIRAVALYYKDRKGIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1189
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y233_METJA (Q57685)
Other databases:
- EMBL: L77117 - PIR: B64329 - RefSeq: NP_247204.1 - ProteinModelPortal: Q57685 - GeneID: 1451086 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0233 - NMPDR: fig|243232.1.peg.241 - TIGR: MJ0233 - HOGENOM: HBG119768 - OMA: LYYKDRK - ProtClustDB: CLSK2517559 - BioCyc: MJAN243232:MJ_0233-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31307; Mature: 31176
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc70fd2c)-; HASH(0xbee9b4c)-; HASH(0xc2fdab8)-; HASH(0xb90611c)-; HASH(0xb92bdc8)-; HASH(0xc4e73ec)-; HASH(0xbeef084)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTIESYLTNSYNYIIFNFKKLCIGGLMSAIVGAMSGVTTAFIDLFMERANYDIMHIIMS CCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FLIYFGIIFIIGLIVSAIIGGYNVRIMKTTVEGLNVAPDWNNITDLLYRGILYIVGLVLL HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH NIIFYFIPAILFVFGIFSLYISKIIGAFLIIISILIFIISVISLWLYSKLAEVNYSVKGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YGFFEFKEIFKMIGIRYIILVIIIAIINFIISLIVVLPLNIIDIFISYSALANSILTIIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISIKGISYALSTFVDFYLGVFSIRAVALYYKDRKGIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH >Mature Secondary Structure GTIESYLTNSYNYIIFNFKKLCIGGLMSAIVGAMSGVTTAFIDLFMERANYDIMHIIMS CCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FLIYFGIIFIIGLIVSAIIGGYNVRIMKTTVEGLNVAPDWNNITDLLYRGILYIVGLVLL HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH NIIFYFIPAILFVFGIFSLYISKIIGAFLIIISILIFIISVISLWLYSKLAEVNYSVKGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YGFFEFKEIFKMIGIRYIILVIIIAIINFIISLIVVLPLNIIDIFISYSALANSILTIIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISIKGISYALSTFVDFYLGVFSIRAVALYYKDRKGIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087