Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668383

Identifier: 15668383

GI number: 15668383

Start: 202178

End: 202696

Strand: Direct

Name: 15668383

Synonym: MJ0210.1

Alternate gene names: NA

Gene position: 202178-202696 (Clockwise)

Preceding gene: 15668382

Following gene: 15668384

Centisome position: 12.14

GC content: 25.24

Gene sequence:

>519_bases
TTGTTTAATAAGGTGGCTTTTATGAACATCCCAATGATGGATTTAATAATGATTGTTATAGCCATAATTATAACAATTGG
TAGTTTTTTATTTATAGCATATTTAATTTTCAAATATTCAAAAATAAAGAAACAAGTTAAAATAATAAGAGAGGTTAAGA
TAAACCTACCTAAGATGTTAAAGAGTAATATGATTAAAAATTCTTTTTTGATTATTTCATTACTATGCTTTTACTTTGGA
ATGCTGTATATTGCAGGAGAACTTGTAATATCTCATATATTATTCATTGCAATATGTTGGATTGTAGTATTCCTATACAT
TATTATAAAGGGAGAAACCAGAGGGTATATTTGTGAAGAGGGGTTATTAGTAAGCGGAGTTCTTTATTCATGGAAGGAGT
TTAAAGATGTTAAAATAGAAGACAACTACATAATACTAACAACCCCAATACATAAGATAGTTATTAAAAAAGAAAAAGGC
GTTGAAAATATACTAAAAAATTACTTAAAAAGAAATTAA

Upstream 100 bases:

>100_bases
ATACCTTATGAGACATCAATGGAAGAAGCAGGAAGAAAATTGATTGAACAGCTATAACAAAATAATTTTTATTTTATATT
ATTTCCCATAATTTTTTAAT

Downstream 100 bases:

>100_bases
ATTGTTGGTGGAAAAATGATATTAGTTACTGGAGGAGCAGGTTTTATTGGTAGTCATATAGTGGATAAACTAATCGAAAA
CAACTACGATGTAATTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MFNKVAFMNIPMMDLIMIVIAIIITIGSFLFIAYLIFKYSKIKKQVKIIREVKINLPKMLKSNMIKNSFLIISLLCFYFG
MLYIAGELVISHILFIAICWIVVFLYIIIKGETRGYICEEGLLVSGVLYSWKEFKDVKIEDNYIILTTPIHKIVIKKEKG
VENILKNYLKRN

Sequences:

>Translated_172_residues
MFNKVAFMNIPMMDLIMIVIAIIITIGSFLFIAYLIFKYSKIKKQVKIIREVKINLPKMLKSNMIKNSFLIISLLCFYFG
MLYIAGELVISHILFIAICWIVVFLYIIIKGETRGYICEEGLLVSGVLYSWKEFKDVKIEDNYIILTTPIHKIVIKKEKG
VENILKNYLKRN
>Mature_172_residues
MFNKVAFMNIPMMDLIMIVIAIIITIGSFLFIAYLIFKYSKIKKQVKIIREVKINLPKMLKSNMIKNSFLIISLLCFYFG
MLYIAGELVISHILFIAICWIVVFLYIIIKGETRGYICEEGLLVSGVLYSWKEFKDVKIEDNYIILTTPIHKIVIKKEKG
VENILKNYLKRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y21B_METJA (P81232)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247179.1
- GeneID:   1451060
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0210.1
- NMPDR:   fig|243232.1.peg.216
- TIGR:   MJ0210.1
- ProtClustDB:   CLSK496805
- BioCyc:   MJAN243232:MJ_0210.1-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20084; Mature: 20084

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xae4a318)-; HASH(0xbde5e0c)-; HASH(0xbdce008)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKVAFMNIPMMDLIMIVIAIIITIGSFLFIAYLIFKYSKIKKQVKIIREVKINLPKML
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KSNMIKNSFLIISLLCFYFGMLYIAGELVISHILFIAICWIVVFLYIIIKGETRGYICEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
GLLVSGVLYSWKEFKDVKIEDNYIILTTPIHKIVIKKEKGVENILKNYLKRN
CHHHHHHHHHHHHHCCCEEECCEEEEECCHHHHHHHHHCCHHHHHHHHHHCH
>Mature Secondary Structure
MFNKVAFMNIPMMDLIMIVIAIIITIGSFLFIAYLIFKYSKIKKQVKIIREVKINLPKML
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KSNMIKNSFLIISLLCFYFGMLYIAGELVISHILFIAICWIVVFLYIIIKGETRGYICEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
GLLVSGVLYSWKEFKDVKIEDNYIILTTPIHKIVIKKEKGVENILKNYLKRN
CHHHHHHHHHHHHHCCCEEECCEEEEECCHHHHHHHHHCCHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087