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The map label for this gene is 15668340

Identifier: 15668340

GI number: 15668340

Start: 170807

End: 171010

Strand: Reverse

Name: 15668340

Synonym: MJ0168

Alternate gene names: NA

Gene position: 171010-170807 (Counterclockwise)

Preceding gene: 15668342

Following gene: 15668339

Centisome position: 10.27

GC content: 38.24

Gene sequence:

>204_bases
ATGGCTGAGCTTCCAGTTGCACCATTTGAGAGAATATTGAAAAAGGCTGGTGCTGAGAGAGTTAGCAGAGCAGCTGCAGA
ATACTTAGCAGAGGCTGTTGAAGAGATTGCATTAGAAATTGCAAAAGAAGCAGTTGAATTAGCTAAGCACGCAAAAAGAA
AAACAGTAAAAGTTGAGGATATAAAATTGGCTTTGAAGAAATAA

Upstream 100 bases:

>100_bases
AAATTTTCCAAAGACTTTCACAAAAAATGAAAATGACCGAAAAGTTTAAATAAAGGATTTTATAACAGTATTTATTGGAA
ATCTATTGTGAGGTGGTATT

Downstream 100 bases:

>100_bases
ATTTTATTTTTAAAATTTTTAATTTTTATTATTAATATTTTACTTCCTTCCAAAACTTTAGAATTCTTTTGTTATTTTAA
TTTATATTCATTAATTTATA

Product: histone A1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MAELPVAPFERILKKAGAERVSRAAAEYLAEAVEEIALEIAKEAVELAKHAKRKTVKVEDIKLALKK

Sequences:

>Translated_67_residues
MAELPVAPFERILKKAGAERVSRAAAEYLAEAVEEIALEIAKEAVELAKHAKRKTVKVEDIKLALKK
>Mature_66_residues
AELPVAPFERILKKAGAERVSRAAAEYLAEAVEEIALEIAKEAVELAKHAKRKTVKVEDIKLALKK

Specific function: Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HJA1_METJA (Q57632)

Other databases:

- EMBL:   L77117
- PIR:   A64321
- RefSeq:   NP_247136.1
- ProteinModelPortal:   Q57632
- SMR:   Q57632
- GeneID:   1451015
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0168
- NMPDR:   fig|243232.1.peg.173
- TIGR:   MJ0168
- HOGENOM:   HBG392052
- OMA:   IDRLIRK
- ProtClustDB:   CLSK539697
- BioCyc:   MJAN243232:MJ_0168-MONOMER
- GO:   GO:0005694
- GO:   GO:0005737
- InterPro:   IPR003958
- InterPro:   IPR009072
- Gene3D:   G3DSA:1.10.20.10

Pfam domain/function: PF00808 CBFD_NFYB_HMF; SSF47113 Histone-fold

EC number: NA

Molecular weight: Translated: 7384; Mature: 7253

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELPVAPFERILKKAGAERVSRAAAEYLAEAVEEIALEIAKEAVELAKHAKRKTVKVED
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IKLALKK
HHHHHCC
>Mature Secondary Structure 
AELPVAPFERILKKAGAERVSRAAAEYLAEAVEEIALEIAKEAVELAKHAKRKTVKVED
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IKLALKK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087