| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668296
Identifier: 15668296
GI number: 15668296
Start: 123027
End: 123377
Strand: Reverse
Name: 15668296
Synonym: MJ0125
Alternate gene names: NA
Gene position: 123377-123027 (Counterclockwise)
Preceding gene: 15668297
Following gene: 298575366
Centisome position: 7.41
GC content: 28.77
Gene sequence:
>351_bases ATGCCGAAGAGAGATATAAAGGCATTTTTATATGATATTTTATCCTACATGGATGATATAATTAACTTCACTAAAGATAT GGATTATGAGGAGTTTATAAACAATAAAGCAATAAAATACGCAGTTATTAGATGCTTAGAAGTTATTGGAGAGGCAGTTA AAAAGATACCAAAGGATATTAGAGAAAAATATCCACACATCCCATTTAAAGAATTGGCTGGAATGAGGGATAAATTAATC CACCAATATTTTGGTGTAGATTATTTAACAGTTTGGGAAACTGCAAAATATGAAATTCCAGAGATAAAGAAAGAGTTTGA AAAGATTATAAAAGACCTTGAAGAAAAATAA
Upstream 100 bases:
>100_bases TTGGAAATTAAAGTTGATTTAATTACAAAAAACTCTATTCACAACCCTTATGTAAAAAAATCCATTGAAGAAGATTTAAT TTATATTTAATGGTGGTTAA
Downstream 100 bases:
>100_bases ATATTGATTCTTTGATTATTCTAATGTGGGGATTATTATGATAAGAGAAGAATATTTAGATGTTGAGAATATAAAAGAAA AACTTCAAGAAATTGGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MPKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLI HQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK
Sequences:
>Translated_116_residues MPKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLI HQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK >Mature_115_residues PKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLIH QYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008201 [H]
Pfam domain/function: PF01934 DUF86 [H]
EC number: NA
Molecular weight: Translated: 13971; Mature: 13839
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDI CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH REKYPHIPFKELAGMRDKLIHQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDI CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH REKYPHIPFKELAGMRDKLIHQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]