Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668267

Identifier: 15668267

GI number: 15668267

Start: 89964

End: 90752

Strand: Reverse

Name: 15668267

Synonym: MJ0096

Alternate gene names: NA

Gene position: 90752-89964 (Counterclockwise)

Preceding gene: 15668268

Following gene: 15668266

Centisome position: 5.45

GC content: 28.9

Gene sequence:

>789_bases
ATGGAAGTAAAAGCCATGGAGATTTTTAAAAAATATCTCTCTTTAAATATTCCAAAAAAGATTTTAATAACCTATTTTTT
GTGTTGGGCAGGATTTCTGTTTTCTTTCTCTGTAGGGAAGTTCCTTTTATATTTATCATCTATTTTAAAATCCAATTTTA
TATCTGAACCAGCTAAATTAGCTCAAAGTGTTGGAACTGCAAAATTTAACGCTGTTTCTTCAGCTGTATCGAATACTGTT
GGGGTAAAAAATGCTTACTTAACTTATGCTCTTTCATATATAGTTTCTAATTTTATGGGGTGTTTGATTATAATGTTTGC
TCTTGGAGCACTTGCTTATTTATATAAGAAAGACTTAGAAAAAGCTAAAACACTTGAAGAGAAAGAAGAACTATTTAAGT
GTTATCAAAAATATCTATTAATATTATTTATCTTTACTGTCATAAATCCACTGACTGGATTAATTGGAGTAAATCTTCAA
TATTCTGATTTAATTGCTGTCCTTCCACATGGATTTTTTGAATTTTTTGGATTTGCCACTGCAGTCGTTGTTGGAGTAGA
ATTATCAAATAAAATTCTCCCAATAGTTAAAAGAGAAATAACAAGTAAAAAAATAGTAATTCTTATAGCTTGTTCCTTTA
TATTTATCTTTATTGCTGGAATGTTGGAGCCAATTGACTGGTTTATCTATAGCTATGCAAAAGCTTATGGAATTCCCCTA
TTAGCTGCCTTTGCAACTGGGTATAAAAACTTATTTTTGTATCTAATTTCTATGCTTTTTAAATCTTGA

Upstream 100 bases:

>100_bases
GCTACAAATCCGTTAGGATTTATTTAACCAAAGCGTAGCTTCGGTAATGAAAACCTAACAGTTTCCATCTAAACGTTTAT
AAAAAGTTCCAAGGGAAATC

Downstream 100 bases:

>100_bases
GGTGATACGATTAAAGTATTGGCTATAGATATATCTGGAAGGCATCATGAAAATGATATATTTTTTAGAGTTTATGCTGG
GGTTTTAGTTGAGATTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKLAQSVGTAKFNAVSSAVSNTV
GVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLEKAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQ
YSDLIAVLPHGFFEFFGFATAVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL
LAAFATGYKNLFLYLISMLFKS

Sequences:

>Translated_262_residues
MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKLAQSVGTAKFNAVSSAVSNTV
GVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLEKAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQ
YSDLIAVLPHGFFEFFGFATAVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL
LAAFATGYKNLFLYLISMLFKS
>Mature_262_residues
MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKLAQSVGTAKFNAVSSAVSNTV
GVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLEKAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQ
YSDLIAVLPHGFFEFFGFATAVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL
LAAFATGYKNLFLYLISMLFKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y096_METJA (Q57561)

Other databases:

- EMBL:   L77117
- PIR:   H64311
- RefSeq:   NP_247060.1
- ProteinModelPortal:   Q57561
- GeneID:   1450935
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0096
- NMPDR:   fig|243232.1.peg.97
- TIGR:   MJ0096
- HOGENOM:   HBG540384
- OMA:   SIWYSYF
- ProtClustDB:   CLSK876068
- BioCyc:   MJAN243232:MJ_0096-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29464; Mature: 29464

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc012cb8)-; HASH(0xc0c1fe8)-; HASH(0xc7289f0)-; HASH(0xbeff900)-; HASH(0xbef5bb0)-; HASH(0xbea262c)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKL
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AQSVGTAKFNAVSSAVSNTVGVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLE
HHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQYSDLIAVLPHGFFEFFGFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LAAFATGYKNLFLYLISMLFKS
HHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087