Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668192

Identifier: 15668192

GI number: 15668192

Start: 22762

End: 23889

Strand: Direct

Name: 15668192

Synonym: MJ0021

Alternate gene names: NA

Gene position: 22762-23889 (Clockwise)

Preceding gene: 15668189

Following gene: 15668193

Centisome position: 1.37

GC content: 31.03

Gene sequence:

>1128_bases
ATGAATGTTGAAGAGATTGAAAAATATTTGGAAGAAAATTTTGATAAATTGCCAGAGGGATGTAAGCAGTGTGTTAAAGG
GGGAAAATTAGTTTTATTCATCACAGGAATTTGTAATAACAACTGCTACTACTGTCCTTTATCTGAAAAGAGAAAGAATA
AAGATGTAATATATGCCAATGAGAGGTTAATAACTACCGTTGAAGAGGCTATAGAAGAGGCAAAGCTCTGCAGTAGTAAG
GGAGTAGGAATAACAGGAGGTAATCCTTTATTAAAAATAAATAGAACTGTAAAATTCTTAAAAGCACTAAAAAAAGAGTT
TGATGAATTTCATGCTCATCTATATACAACTCCGGAAACAGTAAATGAAGAGAACTTAAAACTTCTAAAAGAGGCAGATT
TAGATGAGATAAGGCTACATCCAACAAAAATATTCAATGAAGGATATGATGAAGAATATATAAAGTTTTTATGTAATAAA
TTGAACTTATGCAACAAATACATTGAAGATGTTGGGGTTGAAATTCCAGCAATCCCAAATATGGAAAATGAAATTTTAAA
GTTAGCTGAGGCAATTGATGGAATAGCCAAATTTATGAATATCAATGAGCTTGAGTTTTCTGAGGAAAATTATCATGAAT
TAGAGAAGAGAGGTTTTATGCCAAAGGATGATGTAAGTAATGCAATTGCTGGCAGTGAAGAAACAGCTTTAAAAGTTATA
AAAGAATTTAAAGGTGATTTATTCATTAACTACTGCCCATCAGTTTTAAAAGATGCCATACAGATGAGAAATAGATTAAT
AAATAGAGCTAAGAATGTAGCTAAGCCTTATGAGGTTATAACTGAAGATGGCTTACTATTGAGAGGCATTATGATTTTTG
ACAATGAGGATGATTTAAAGGAAATGGCTGAGATTTTGGAAGAGAATGAGATAGAGTTTGAAATTATTGATAAAAATATA
TGCTTAAATCCATTTATATTAGAGGATATTATTGAAGAGATGAAAAGGCAGAGGTTTCCTATAACATTCTCAGCTTATAT
CTCAGAACTCTACCCTACAGCTGATGCTTTAGAAGTAGAGAGAATCCCATTAATAACTAAAAAACTAAAGTTTAGGAGAA
GAAGATAG

Upstream 100 bases:

>100_bases
TTTAACAGGTTGAATGCAATTTAAATATATTAAGGAACTTTGAAGCTTTTGGCTTCATCTATCCAATAATAAATTACTAT
TCAATATTTACGGTGAAAAC

Downstream 100 bases:

>100_bases
TTTTTTGCAAAAGTTATTAAAATTACTAAGGTTATTTGAACGCCAAAGGCGTTCATTTCTTCATTAATACTCAAAATGTT
TTGCAAAAAACTATAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYANERLITTVEEAIEEAKLCSSK
GVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPETVNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNK
LNLCNKYIEDVGVEIPAIPNMENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI
KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLKEMAEILEENEIEFEIIDKNI
CLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVERIPLITKKLKFRRRR

Sequences:

>Translated_375_residues
MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYANERLITTVEEAIEEAKLCSSK
GVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPETVNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNK
LNLCNKYIEDVGVEIPAIPNMENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI
KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLKEMAEILEENEIEFEIIDKNI
CLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVERIPLITKKLKFRRRR
>Mature_375_residues
MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYANERLITTVEEAIEEAKLCSSK
GVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPETVNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNK
LNLCNKYIEDVGVEIPAIPNMENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI
KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLKEMAEILEENEIEFEIIDKNI
CLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVERIPLITKKLKFRRRR

Specific function: Unknown

COG id: COG2108

COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y021_METJA (Q60332)

Other databases:

- EMBL:   L77117
- PIR:   E64302
- RefSeq:   NP_246984.1
- ProteinModelPortal:   Q60332
- SMR:   Q60332
- GeneID:   1450859
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0021
- NMPDR:   fig|243232.1.peg.21
- TIGR:   MJ0021
- HOGENOM:   HBG645904
- OMA:   DCFYCPL
- ProtClustDB:   CLSK2749829
- BioCyc:   MJAN243232:MJ_0021-MONOMER
- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR001989
- InterPro:   IPR007197
- Gene3D:   G3DSA:3.20.20.70
- SMART:   SM00729

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 43447; Mature: 43447

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS01087 RADICAL_ACTIVATING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYAN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCCEEEEC
ERLITTVEEAIEEAKLCSSKGVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPET
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCCCC
VNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNKLNLCNKYIEDVGVEIPAIPN
CCHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
MENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLK
HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEECCCHHHH
EMAEILEENEIEFEIIDKNICLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVE
HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH
RIPLITKKLKFRRRR
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYAN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCCEEEEC
ERLITTVEEAIEEAKLCSSKGVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPET
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCCCC
VNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNKLNLCNKYIEDVGVEIPAIPN
CCHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
MENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLK
HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEECCCHHHH
EMAEILEENEIEFEIIDKNICLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVE
HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH
RIPLITKKLKFRRRR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087