| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668174
Identifier: 15668174
GI number: 15668174
Start: 3340
End: 4071
Strand: Reverse
Name: 15668174
Synonym: MJ0002
Alternate gene names: NA
Gene position: 4071-3340 (Counterclockwise)
Preceding gene: 15668177
Following gene: 15668173
Centisome position: 0.24
GC content: 31.69
Gene sequence:
>732_bases ATGGAGATATTTATGGAAGTTCCAATATTCGTCGTTATCTCTGGCAGTGATTTGTATGGGATTCCAAATCCAAGTGATGT AGATATCAGAGGCGCTCATATCTTGGATAGAGAGCTATTTATTAAGAACTGCCTATATAAAAGCAAGGAAGAAGAAGTTA TAAATAAAATGTTTGGAAAGTGTGATTTTGTTAGCTTTGAGCTTGGAAAGTTTTTAAGAGAGTTATTAAAGCCAAATGCT AACTTTATTGAGATAGCCTTATCTGATAAGGTTTTGTATTCATCGAAGTATCATGAAGATGTTAAAGGGATAGCTTATAA TTGCATTTGCAAAAAGCTATATCATCATTGGAAGGGATTTGCCAAACCTCTACAAAAATTGTGTGAGAAAGAAAGTTATA ACAATCCAAAGACACTTTTATATATTTTGAGAGCTTATTATCAAGGTATTTTATGCTTAGAGAGTGGAGAATTTAAATCA GATTTTAGCTCATTTAGATGCTTAGATTGCTACGATGAGGATATTGTGAGCTATCTTTTTGAATGTAAAGTAAATAAAAA GCCAGTTGATGAGAGTTATAAGAAGAAAATAAAAAGCTATTTTTATGAGTTGGGTGTATTGTTAGATGAGAGCTATAAAA ACTCTAACCTAATTGATGAGCCATCAGAAACTGCAAAGATTAAGGCTATAGAGCTTTATAAAAAGCTATACTTTGAGGAT GTGAGAGAATGA
Upstream 100 bases:
>100_bases CCAATTATAAAAAATTATATAAAAAATTACATAAGTCCTATTATAAAATACTACCAATTAGAATTTCTAATAATTTTGGA GATATTAAAAATCCAATAGC
Downstream 100 bases:
>100_bases TAAGCAGTAGATGCAAAAATATAAAACCATCAGCAATTAGGGAGATATTTAACTTAGCTACATCTGATTGCATAAATTTA GGAATAGGAGAGCCAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGKCDFVSFELGKFLRELLKPNA NFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGFAKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKS DFSSFRCLDCYDEDIVSYLFECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED VRE
Sequences:
>Translated_243_residues MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGKCDFVSFELGKFLRELLKPNA NFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGFAKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKS DFSSFRCLDCYDEDIVSYLFECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED VRE >Mature_243_residues MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGKCDFVSFELGKFLRELLKPNA NFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGFAKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKS DFSSFRCLDCYDEDIVSYLFECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED VRE
Specific function: Unknown
COG id: COG3541
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y002_METJA (Q60312)
Other databases:
- EMBL: L77117 - PIR: B64300 - RefSeq: NP_246965.1 - GeneID: 1450841 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0002 - NMPDR: fig|243232.1.peg.2 - TIGR: MJ0002 - ProtClustDB: CLSK2749828 - BioCyc: MJAN243232:MJ_0002-MONOMER - InterPro: IPR018775
Pfam domain/function: PF10127 Nuc-transf
EC number: NA
Molecular weight: Translated: 28492; Mature: 28492
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGK CCEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC CDFVSFELGKFLRELLKPNANFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGF CCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKSDFSSFRCLDCYDEDIVSYLF HHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHCEEHHHHHHHHHHHHH ECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VRE HCC >Mature Secondary Structure MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGK CCEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC CDFVSFELGKFLRELLKPNANFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGF CCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKSDFSSFRCLDCYDEDIVSYLF HHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHCEEHHHHHHHHHHHHH ECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VRE HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087