Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668174

Identifier: 15668174

GI number: 15668174

Start: 3340

End: 4071

Strand: Reverse

Name: 15668174

Synonym: MJ0002

Alternate gene names: NA

Gene position: 4071-3340 (Counterclockwise)

Preceding gene: 15668177

Following gene: 15668173

Centisome position: 0.24

GC content: 31.69

Gene sequence:

>732_bases
ATGGAGATATTTATGGAAGTTCCAATATTCGTCGTTATCTCTGGCAGTGATTTGTATGGGATTCCAAATCCAAGTGATGT
AGATATCAGAGGCGCTCATATCTTGGATAGAGAGCTATTTATTAAGAACTGCCTATATAAAAGCAAGGAAGAAGAAGTTA
TAAATAAAATGTTTGGAAAGTGTGATTTTGTTAGCTTTGAGCTTGGAAAGTTTTTAAGAGAGTTATTAAAGCCAAATGCT
AACTTTATTGAGATAGCCTTATCTGATAAGGTTTTGTATTCATCGAAGTATCATGAAGATGTTAAAGGGATAGCTTATAA
TTGCATTTGCAAAAAGCTATATCATCATTGGAAGGGATTTGCCAAACCTCTACAAAAATTGTGTGAGAAAGAAAGTTATA
ACAATCCAAAGACACTTTTATATATTTTGAGAGCTTATTATCAAGGTATTTTATGCTTAGAGAGTGGAGAATTTAAATCA
GATTTTAGCTCATTTAGATGCTTAGATTGCTACGATGAGGATATTGTGAGCTATCTTTTTGAATGTAAAGTAAATAAAAA
GCCAGTTGATGAGAGTTATAAGAAGAAAATAAAAAGCTATTTTTATGAGTTGGGTGTATTGTTAGATGAGAGCTATAAAA
ACTCTAACCTAATTGATGAGCCATCAGAAACTGCAAAGATTAAGGCTATAGAGCTTTATAAAAAGCTATACTTTGAGGAT
GTGAGAGAATGA

Upstream 100 bases:

>100_bases
CCAATTATAAAAAATTATATAAAAAATTACATAAGTCCTATTATAAAATACTACCAATTAGAATTTCTAATAATTTTGGA
GATATTAAAAATCCAATAGC

Downstream 100 bases:

>100_bases
TAAGCAGTAGATGCAAAAATATAAAACCATCAGCAATTAGGGAGATATTTAACTTAGCTACATCTGATTGCATAAATTTA
GGAATAGGAGAGCCAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGKCDFVSFELGKFLRELLKPNA
NFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGFAKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKS
DFSSFRCLDCYDEDIVSYLFECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED
VRE

Sequences:

>Translated_243_residues
MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGKCDFVSFELGKFLRELLKPNA
NFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGFAKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKS
DFSSFRCLDCYDEDIVSYLFECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED
VRE
>Mature_243_residues
MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGKCDFVSFELGKFLRELLKPNA
NFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGFAKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKS
DFSSFRCLDCYDEDIVSYLFECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED
VRE

Specific function: Unknown

COG id: COG3541

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y002_METJA (Q60312)

Other databases:

- EMBL:   L77117
- PIR:   B64300
- RefSeq:   NP_246965.1
- GeneID:   1450841
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0002
- NMPDR:   fig|243232.1.peg.2
- TIGR:   MJ0002
- ProtClustDB:   CLSK2749828
- BioCyc:   MJAN243232:MJ_0002-MONOMER
- InterPro:   IPR018775

Pfam domain/function: PF10127 Nuc-transf

EC number: NA

Molecular weight: Translated: 28492; Mature: 28492

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGK
CCEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
CDFVSFELGKFLRELLKPNANFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGF
CCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKSDFSSFRCLDCYDEDIVSYLF
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHCEEHHHHHHHHHHHHH
ECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VRE
HCC
>Mature Secondary Structure
MEIFMEVPIFVVISGSDLYGIPNPSDVDIRGAHILDRELFIKNCLYKSKEEEVINKMFGK
CCEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
CDFVSFELGKFLRELLKPNANFIEIALSDKVLYSSKYHEDVKGIAYNCICKKLYHHWKGF
CCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKPLQKLCEKESYNNPKTLLYILRAYYQGILCLESGEFKSDFSSFRCLDCYDEDIVSYLF
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHCEEHHHHHHHHHHHHH
ECKVNKKPVDESYKKKIKSYFYELGVLLDESYKNSNLIDEPSETAKIKAIELYKKLYFED
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VRE
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087