Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15646090

GI number: 15646090

Start: 1555448

End: 1556245

Strand: Reverse

Name: Not Available

Synonym: HP1481

Alternate gene names: NA

Gene position: 1556245-1555448 (Counterclockwise)

Preceding gene: 15646091

Following gene: 15646089

Centisome position: 93.31

GC content: 40.35

Gene sequence:

>798_bases
ATGCGAGTGTTTGCTTTGCAATTAGAATCTTTTAAAGAAAATCTCATGCAATCCTTATTCAACTCTATACCCAAGAAAAG
CGTGATCGTGTTGCCTGAATACGTGATCAACCCCTTTTTCCACCATAACATGGGATTGGATGTGAATGAAATCAGCGATC
AGTCTGCACGAGCGGTTGAGTTTTTATCGCAAAAATGCGAAGAATTAGATTTGATCGTTTCAGCCCCGGTGCTTTTAGAA
GAACATTCTAAAATCTATAAAAAAATCGCCCTCATTTCTAAAGAAAGCGTGAAGTATTACACGCAACAACGCTTAATTCC
CTATCCTCATTGGGATGAAGAGAGCTTTTTTGACAACGAAAAAAGTGCTTTTAAAGAATTGTTAGTCTTTGAAAGAGACG
GCTTGAAATTCGCCCCTTTGTTTGGCTTTGAAGCGCATTTTGATGAAATATGGGTTCAGGCTAAAAATCAGGGCGTGGAT
GTGGTGCTTTTAAGCAGCGTGGCCACCTTTGAATCCAATGAAAGATGGCGGCTTTTGTGCCAGATGCGCGCTTTTTGCGC
TTCTTGCGTGGTGGTTAGGGCTAATAGGATCGGAGCGTATCGCCAGATCATTGTAGAAGAAGATCAAAAAAACGAATTTT
TGTGGAAATTTTATGGGGATAGTTTTGTGGCCTTGCCTAATGGCGCTATTGAAGATTCTTTAGAGGGTAAAATGGGGGCT
TTGAACGCTCAAATAGATAAAAACGATATAGACGAATGGGCTAAATTGTGGCATTTTAGAACGATTAAAGAGGGTTGA

Upstream 100 bases:

>100_bases
TAAAACGGCCATGCAAGAGTTGTTTTTGGCTCAAAAGCTTTTAGAAAACGCTTATTTAGAGCATGAAAAACTCCAAACGC
CAGACCAAAAGGCTTAAAGC

Downstream 100 bases:

>100_bases
ATGATTGATAGAAAACTTTTATTGCAAGATTTTGACAAGGTGGCTCTTTCTTTAAAAAAGCGTAATAATGCGATGGATGA
TGAATTAGAGCGTTTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase Carbon-Nitrogen Family; Carbon-Nitrogen Hydrolase

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVEFLSQKCEELDLIVSAPVLLE
EHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNEKSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVD
VVLLSSVATFESNERWRLLCQMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA
LNAQIDKNDIDEWAKLWHFRTIKEG

Sequences:

>Translated_265_residues
MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVEFLSQKCEELDLIVSAPVLLE
EHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNEKSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVD
VVLLSSVATFESNERWRLLCQMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA
LNAQIDKNDIDEWAKLWHFRTIKEG
>Mature_265_residues
MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVEFLSQKCEELDLIVSAPVLLE
EHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNEKSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVD
VVLLSSVATFESNERWRLLCQMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA
LNAQIDKNDIDEWAKLWHFRTIKEG

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30759; Mature: 30759

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVE
CEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCHHHCCCCCCHHHHCCHHHHHHH
FLSQKCEELDLIVSAPVLLEEHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCH
KSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVDVVLLSSVATFESNERWRLLC
HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHEECCCCCCEEEEEHHHHCCCCCHHHHHH
QMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA
HHHHHHHHHHHHHHHHHCHHHHHEEECCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCC
LNAQIDKNDIDEWAKLWHFRTIKEG
CCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVE
CEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCHHHCCCCCCHHHHCCHHHHHHH
FLSQKCEELDLIVSAPVLLEEHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCH
KSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVDVVLLSSVATFESNERWRLLC
HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHEECCCCCCEEEEEHHHHCCCCCHHHHHH
QMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA
HHHHHHHHHHHHHHHHHCHHHHHEEECCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCC
LNAQIDKNDIDEWAKLWHFRTIKEG
CCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA