| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645756
GI number: 15645756
Start: 1203006
End: 1205285
Strand: Reverse
Name: Not Available
Synonym: HP1142
Alternate gene names: NA
Gene position: 1205285-1203006 (Counterclockwise)
Preceding gene: 15645757
Following gene: 15645755
Centisome position: 72.27
GC content: 29.74
Gene sequence:
>2280_bases GTGAGCGTGAATAGTAATGGCAATAAAGACAAACAACAGCAGAATGTAAGCAGTGGGATTTCTCAAATCTCATTAAAAAA GGTGGCAACTTTTGATGAAAATGGGGCGAGTTTTGAGAATTTAAATTCTATCAACTTTATTTATGGGGCTAATGGGAGCG GTAAGACAACCACTTCTAGTTTTTTAAAAAATCTAGCTGAAAATGGGATTGAAGACAAGTTTGCTAATAGTAAAATAGCA TGGTATAACAATGAGAGTTTAAAGATTGAAGTTTATAACAAGCAATTTAAAGAAGAGCAATTGAGAAACTCTCAAGTTAA AGGCATTTTTACGCTCGGTAAAAAAACGAACGAGAATTTAGAAAAAATTGAAAGCAAGAAAGAATCAATAAACAAAGAGA ATGAAAAGAAAATAAAAAATGAAGCAAGCTTGCAAGTTTTAACACAAAAAAAGGAAAAGGAAGAAAAGGATTTTGCTGAT AGGTGTTGGGAAAAACTTTATAAGAAAAATGAAGAGGATTTTAAAGAAACGCTAGAAGGCTTTAAGCGTAAAGAGAAGTT TAAAGAAAAAATCCTTAAGGAATTTGAAAACGATAAATACAATCAAAGCGAAATAGTAGGGTTAGAAAAATTAAAGGAAA AAATTGAGATTGTTTTTGGTGAAAACCAAACAGAATTGGCACTATTGGAATGCAATTTAACAGATTTTGATTTTATTGAA AATCATTCTATTTGGGAACAAAAAATTGTAGGGAGTGGTGATGCAGCCATTGCAGATTTAATAAAAAGATTAAGCAATGA AGATTGGGTAGCTCAAGGTAGAGAATATATAAAAGATAATAGTATATGCCCTTTCTGTCAAAAAGAAACCATTACCGAAG AATTTAAAAAACAACTAGAATCTTATTTTGATACAAGTTATCAAGAATCTATTGAAACGATCAAGGAAAAGATGGAAGAC TACGCAAGCAGAACCGCTGGAGCACTGGAGCGACTTGATAAGATTGTTGAAACAGAACAGAAGAATCAACAAACTAAATT GGACACAGAAAATTTGAAAATAATTATTGAAACTTTGAGAAGTAAAATCAATGGGAATCAGCAAAAGATGCTTGATAAAA GTAAAGAAATGAGCAGAAATTTTAAGCTTGATAGCACTAAAAACGAGATAGACGCAATTAAAGATTTGATTAAAAAGGCT AATGAGCAAATAGCCAATTATAATGAGATGATAAAGGATATTGAAAAACAGAAAAAGAGTTGTAAGGAACAAACTTGGAA ATTTCTAGTCAATGAATTTAAAAGTGATATACAAGAATATAATAAAAAGTATTGCGGTTTGGAGAAAGGAATAAACAATT TAGAGAAAGCAATTAGTGAAAATCAAGAAGAGGTAAAGAAATTAGAAAATGAAATTAAGGAATTAGAAAAAACTATGGTA AGCATAAAGCCCATTGTCAATGAAATCAATACGCTTTTAAAAGGGTATGGATTCGCGAATTTTAGTTTGGCATGCACTGA AGATGAAAAATTTTATCGTATTCAAAGAGAAGATGGTCAATTAGTAGGAGAAACACTGAGCGAGGGTGAAGTTACTTTCA TCACTTTCTTATATTATTATCATTTAGCAAAAGGCTCTTTAGAAGAGAACGATATATCAAAAAATAAGGTTTTAGTGATT GATGACCCCATTTCAAGTTTGGATAGCAATATATTGTTTATAGTGAGTGTTTTAGTTAAAGATCTTATGAAAGAAGCCAT GGAAGAAAAAACAAACATCAAGCAAGTTATTATACTAACCCACAACACATATTTTTACAAGGAAATTACATTAGAATGTG ATTTAAAACGCTATCAAGGGAAATATTCTTTTTGGATAATTAAAAAGGATAATAATGTTTCAAAAATTAAAGATTATAAA GAAAATCCCATTAAAAATTCCTATGAATTGCTATGGCAAGAAGTAAAACAAGCAAAAGAAAATAATGCTTCTTGGGTATC TTTACAAAATGTTATGCGAAGAATTATTGAGTATTACTTTAGGATTTTAGGCGGTTTTAAACATAATGATAGCTTGAGTG AATGTTTTGAAAATATTGAAGAAAAACGAGTGTGTAATTCTTTCATTTCATGGTTTAATGATGGCTCTCATGGGATTTCA GATGATTTGTTTATGCAAAGTCAAGATACAAGTATTGAGACATATTTAAAAGTTTTTGAAAAAATATTTAAAGAAACCGG TCATGAAGCTCATTATAAAATGATGATGAGAATGAAGTAA
Upstream 100 bases:
>100_bases TGCGATAGGGCAAGTGAAAGCGTTGGAGCTTGGGTATGATGGGGAGGATTTAGAAGATTAGTTTTTGTGGTGTGCTTTGA GATGATATTGTGAATTAGGA
Downstream 100 bases:
>100_bases TTGAATTAAAAACAAGGAATAACATGCGAATCGTATTTATGGGAACGCCGGGGTTTGCTGAAGTGATCTTAAGGGCGTTA GTTGGAGATAAAGACATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MSVNSNGNKDKQQQNVSSGISQISLKKVATFDENGASFENLNSINFIYGANGSGKTTTSSFLKNLAENGIEDKFANSKIA WYNNESLKIEVYNKQFKEEQLRNSQVKGIFTLGKKTNENLEKIESKKESINKENEKKIKNEASLQVLTQKKEKEEKDFAD RCWEKLYKKNEEDFKETLEGFKRKEKFKEKILKEFENDKYNQSEIVGLEKLKEKIEIVFGENQTELALLECNLTDFDFIE NHSIWEQKIVGSGDAAIADLIKRLSNEDWVAQGREYIKDNSICPFCQKETITEEFKKQLESYFDTSYQESIETIKEKMED YASRTAGALERLDKIVETEQKNQQTKLDTENLKIIIETLRSKINGNQQKMLDKSKEMSRNFKLDSTKNEIDAIKDLIKKA NEQIANYNEMIKDIEKQKKSCKEQTWKFLVNEFKSDIQEYNKKYCGLEKGINNLEKAISENQEEVKKLENEIKELEKTMV SIKPIVNEINTLLKGYGFANFSLACTEDEKFYRIQREDGQLVGETLSEGEVTFITFLYYYHLAKGSLEENDISKNKVLVI DDPISSLDSNILFIVSVLVKDLMKEAMEEKTNIKQVIILTHNTYFYKEITLECDLKRYQGKYSFWIIKKDNNVSKIKDYK ENPIKNSYELLWQEVKQAKENNASWVSLQNVMRRIIEYYFRILGGFKHNDSLSECFENIEEKRVCNSFISWFNDGSHGIS DDLFMQSQDTSIETYLKVFEKIFKETGHEAHYKMMMRMK
Sequences:
>Translated_759_residues MSVNSNGNKDKQQQNVSSGISQISLKKVATFDENGASFENLNSINFIYGANGSGKTTTSSFLKNLAENGIEDKFANSKIA WYNNESLKIEVYNKQFKEEQLRNSQVKGIFTLGKKTNENLEKIESKKESINKENEKKIKNEASLQVLTQKKEKEEKDFAD RCWEKLYKKNEEDFKETLEGFKRKEKFKEKILKEFENDKYNQSEIVGLEKLKEKIEIVFGENQTELALLECNLTDFDFIE NHSIWEQKIVGSGDAAIADLIKRLSNEDWVAQGREYIKDNSICPFCQKETITEEFKKQLESYFDTSYQESIETIKEKMED YASRTAGALERLDKIVETEQKNQQTKLDTENLKIIIETLRSKINGNQQKMLDKSKEMSRNFKLDSTKNEIDAIKDLIKKA NEQIANYNEMIKDIEKQKKSCKEQTWKFLVNEFKSDIQEYNKKYCGLEKGINNLEKAISENQEEVKKLENEIKELEKTMV SIKPIVNEINTLLKGYGFANFSLACTEDEKFYRIQREDGQLVGETLSEGEVTFITFLYYYHLAKGSLEENDISKNKVLVI DDPISSLDSNILFIVSVLVKDLMKEAMEEKTNIKQVIILTHNTYFYKEITLECDLKRYQGKYSFWIIKKDNNVSKIKDYK ENPIKNSYELLWQEVKQAKENNASWVSLQNVMRRIIEYYFRILGGFKHNDSLSECFENIEEKRVCNSFISWFNDGSHGIS DDLFMQSQDTSIETYLKVFEKIFKETGHEAHYKMMMRMK >Mature_758_residues SVNSNGNKDKQQQNVSSGISQISLKKVATFDENGASFENLNSINFIYGANGSGKTTTSSFLKNLAENGIEDKFANSKIAW YNNESLKIEVYNKQFKEEQLRNSQVKGIFTLGKKTNENLEKIESKKESINKENEKKIKNEASLQVLTQKKEKEEKDFADR CWEKLYKKNEEDFKETLEGFKRKEKFKEKILKEFENDKYNQSEIVGLEKLKEKIEIVFGENQTELALLECNLTDFDFIEN HSIWEQKIVGSGDAAIADLIKRLSNEDWVAQGREYIKDNSICPFCQKETITEEFKKQLESYFDTSYQESIETIKEKMEDY ASRTAGALERLDKIVETEQKNQQTKLDTENLKIIIETLRSKINGNQQKMLDKSKEMSRNFKLDSTKNEIDAIKDLIKKAN EQIANYNEMIKDIEKQKKSCKEQTWKFLVNEFKSDIQEYNKKYCGLEKGINNLEKAISENQEEVKKLENEIKELEKTMVS IKPIVNEINTLLKGYGFANFSLACTEDEKFYRIQREDGQLVGETLSEGEVTFITFLYYYHLAKGSLEENDISKNKVLVID DPISSLDSNILFIVSVLVKDLMKEAMEEKTNIKQVIILTHNTYFYKEITLECDLKRYQGKYSFWIIKKDNNVSKIKDYKE NPIKNSYELLWQEVKQAKENNASWVSLQNVMRRIIEYYFRILGGFKHNDSLSECFENIEEKRVCNSFISWFNDGSHGISD DLFMQSQDTSIETYLKVFEKIFKETGHEAHYKMMMRMK
Specific function: Unknown
COG id: COG4694
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88753; Mature: 88622
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNSNGNKDKQQQNVSSGISQISLKKVATFDENGASFENLNSINFIYGANGSGKTTTSS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH FLKNLAENGIEDKFANSKIAWYNNESLKIEVYNKQFKEEQLRNSQVKGIFTLGKKTNENL HHHHHHHCCCCHHHCCCEEEEECCCEEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCHHH EKIESKKESINKENEKKIKNEASLQVLTQKKEKEEKDFADRCWEKLYKKNEEDFKETLEG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FKRKEKFKEKILKEFENDKYNQSEIVGLEKLKEKIEIVFGENQTELALLECNLTDFDFIE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHC NHSIWEQKIVGSGDAAIADLIKRLSNEDWVAQGREYIKDNSICPFCQKETITEEFKKQLE CCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SYFDTSYQESIETIKEKMEDYASRTAGALERLDKIVETEQKNQQTKLDTENLKIIIETLR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SKINGNQQKMLDKSKEMSRNFKLDSTKNEIDAIKDLIKKANEQIANYNEMIKDIEKQKKS HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CKEQTWKFLVNEFKSDIQEYNKKYCGLEKGINNLEKAISENQEEVKKLENEIKELEKTMV HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SIKPIVNEINTLLKGYGFANFSLACTEDEKFYRIQREDGQLVGETLSEGEVTFITFLYYY HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHEEECCCCHHHHHHHCCCCHHHHHHHHHH HLAKGSLEENDISKNKVLVIDDPISSLDSNILFIVSVLVKDLMKEAMEEKTNIKQVIILT HHHCCCCCCCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE HNTYFYKEITLECDLKRYQGKYSFWIIKKDNNVSKIKDYKENPIKNSYELLWQEVKQAKE CCEEEEEEEEEEEHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH NNASWVSLQNVMRRIIEYYFRILGGFKHNDSLSECFENIEEKRVCNSFISWFNDGSHGIS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DDLFMQSQDTSIETYLKVFEKIFKETGHEAHYKMMMRMK HHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure SVNSNGNKDKQQQNVSSGISQISLKKVATFDENGASFENLNSINFIYGANGSGKTTTSS CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH FLKNLAENGIEDKFANSKIAWYNNESLKIEVYNKQFKEEQLRNSQVKGIFTLGKKTNENL HHHHHHHCCCCHHHCCCEEEEECCCEEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCHHH EKIESKKESINKENEKKIKNEASLQVLTQKKEKEEKDFADRCWEKLYKKNEEDFKETLEG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FKRKEKFKEKILKEFENDKYNQSEIVGLEKLKEKIEIVFGENQTELALLECNLTDFDFIE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHC NHSIWEQKIVGSGDAAIADLIKRLSNEDWVAQGREYIKDNSICPFCQKETITEEFKKQLE CCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SYFDTSYQESIETIKEKMEDYASRTAGALERLDKIVETEQKNQQTKLDTENLKIIIETLR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SKINGNQQKMLDKSKEMSRNFKLDSTKNEIDAIKDLIKKANEQIANYNEMIKDIEKQKKS HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CKEQTWKFLVNEFKSDIQEYNKKYCGLEKGINNLEKAISENQEEVKKLENEIKELEKTMV HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SIKPIVNEINTLLKGYGFANFSLACTEDEKFYRIQREDGQLVGETLSEGEVTFITFLYYY HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHEEECCCCHHHHHHHCCCCHHHHHHHHHH HLAKGSLEENDISKNKVLVIDDPISSLDSNILFIVSVLVKDLMKEAMEEKTNIKQVIILT HHHCCCCCCCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE HNTYFYKEITLECDLKRYQGKYSFWIIKKDNNVSKIKDYKENPIKNSYELLWQEVKQAKE CCEEEEEEEEEEEHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH NNASWVSLQNVMRRIIEYYFRILGGFKHNDSLSECFENIEEKRVCNSFISWFNDGSHGIS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DDLFMQSQDTSIETYLKVFEKIFKETGHEAHYKMMMRMK HHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA