| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645757
GI number: 15645757
Start: 1205325
End: 1206626
Strand: Reverse
Name: Not Available
Synonym: HP1143
Alternate gene names: NA
Gene position: 1206626-1205325 (Counterclockwise)
Preceding gene: 15645759
Following gene: 15645756
Centisome position: 72.35
GC content: 39.78
Gene sequence:
>1302_bases ATGCAAGAAAATCAAACCCGTCCTTTTATATGCCCCAAGTGTCAAGAGCCAATTGATGTGAATGAAGCGTTATACAAACA GATTGAGCAAGAAAATCAAAATAAGTTTTTAGCCCAACAGAAAGAGTTTGAAAAAGAAGTGAATGAAAAAAGAGCGCAGT ATCTAAGCTATTTCAAAAATTTAGAGCAAAAAGAAGAGACCCTAAAAGAGCGAGAGAAAGAGCAACAGGCCAAATTTGAT GAGGCGGTCAAACAAGCGAGTGCCTTAGCCTTGCAAGATGAAAGGGCTAAGATCATTGAAGAAGCCAGAAAAAACGCTTT TTTAGAGCAGCAAAAGGGCTTGGAATTGTTGCAAAAAGAATTGGATGAGAAGTCCAAACAAGTTCAGGAATTGCACCAAA AAGAAGCGGAAATTGAAAGGCTAAAAAGAGAAAATAACGAAGCCGAGAGCCGATTAAAAGCTGAAAATGAAAAAAAATTG AATGAAAAATTGGATTTGGAGAGAGAAAAAATAGAAAAAGCCTTGCATGAAAAAAATGAATTGAAATTCAAGCAGCAAGA AGAGCAATTAGAAATGTTAAGAAACGAGTTGAAAAACGCTCAAAGAAAGGCTGAATTAAGTTCGCAACAATTCCAGGGCG AGGTGCAAGAATTGGCGATTGAAGAGTTTTTGAGGCAAAAATTCCCCCTAGATTGCATTGAAGAAATCAAAAAAGGGCAA AGAGGGGGCGATTGCATTCAAGTGGTGCATACTAGGGAATTTCAAAATTGCGGGAAAATTTATTATGAGAGCAAACGCAC CAAAGAATTTCAAAAAGCTTGGGTGGAAAAGCTTAAAAGCGACATGCGAGAGATTGGGGCTGATGTGGGGGTCATTGTGA GTGAAGCGCTGCCTAAAGAGATGGAGAGGATGGGGTTATTTGAAGGGGTGTGGGTGTGTTCGTTTGAAGAGTTTAAGGGG TTGAGCGCGGTGTTAAGAGAGGGGGTTATTCAAGTGAGTTTGGCTAAAAAAAGTCAGGAAAATAAGGGCGATAAAGTGAA TCTGCTCTATCATTATTTGACAAGCTCTGAATTTTCTATGCAAGTGAATGTGATTATAGAGGGGTTTGAGCAATTGAGAG CGGATTTAGAAAGCGAAAAACGCGCGATGGCTAGGATTTGGAAAAGCAGAGAAAAGCAAATTGACAAAGTGTTTGAGGGC ACGATTAACATGTATGGCTCTATCAAGGGCATTGCAGGTAATGCGATAGGGCAAGTGAAAGCGTTGGAGCTTGGGTATGA TGGGGAGGATTTAGAAGATTAG
Upstream 100 bases:
>100_bases AAAATCCCTATTTTACTGAACTTATTGGATAAAACCTGCTTAAGTTAAATTGATCTCATTCTATTATAAAATATAAAAAA TCAAATCTTAAAGGAAAATC
Downstream 100 bases:
>100_bases TTTTTGTGGTGTGCTTTGAGATGATATTGTGAATTAGGAGTGAGCGTGAATAGTAATGGCAATAAAGACAAACAACAGCA GAATGTAAGCAGTGGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MQENQTRPFICPKCQEPIDVNEALYKQIEQENQNKFLAQQKEFEKEVNEKRAQYLSYFKNLEQKEETLKEREKEQQAKFD EAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKELDEKSKQVQELHQKEAEIERLKRENNEAESRLKAENEKKL NEKLDLEREKIEKALHEKNELKFKQQEEQLEMLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDCIEEIKKGQ RGGDCIQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSDMREIGADVGVIVSEALPKEMERMGLFEGVWVCSFEEFKG LSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSMQVNVIIEGFEQLRADLESEKRAMARIWKSREKQIDKVFEG TINMYGSIKGIAGNAIGQVKALELGYDGEDLED
Sequences:
>Translated_433_residues MQENQTRPFICPKCQEPIDVNEALYKQIEQENQNKFLAQQKEFEKEVNEKRAQYLSYFKNLEQKEETLKEREKEQQAKFD EAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKELDEKSKQVQELHQKEAEIERLKRENNEAESRLKAENEKKL NEKLDLEREKIEKALHEKNELKFKQQEEQLEMLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDCIEEIKKGQ RGGDCIQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSDMREIGADVGVIVSEALPKEMERMGLFEGVWVCSFEEFKG LSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSMQVNVIIEGFEQLRADLESEKRAMARIWKSREKQIDKVFEG TINMYGSIKGIAGNAIGQVKALELGYDGEDLED >Mature_433_residues MQENQTRPFICPKCQEPIDVNEALYKQIEQENQNKFLAQQKEFEKEVNEKRAQYLSYFKNLEQKEETLKEREKEQQAKFD EAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKELDEKSKQVQELHQKEAEIERLKRENNEAESRLKAENEKKL NEKLDLEREKIEKALHEKNELKFKQQEEQLEMLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDCIEEIKKGQ RGGDCIQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSDMREIGADVGVIVSEALPKEMERMGLFEGVWVCSFEEFKG LSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSMQVNVIIEGFEQLRADLESEKRAMARIWKSREKQIDKVFEG TINMYGSIKGIAGNAIGQVKALELGYDGEDLED
Specific function: Unknown
COG id: COG4487
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50645; Mature: 50645
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQENQTRPFICPKCQEPIDVNEALYKQIEQENQNKFLAQQKEFEKEVNEKRAQYLSYFKN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEQKEETLKEREKEQQAKFDEAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDEKSKQVQELHQKEAEIERLKRENNEAESRLKAENEKKLNEKLDLEREKIEKALHEKNE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LKFKQQEEQLEMLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDCIEEIKKGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC RGGDCIQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSDMREIGADVGVIVSEALPKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MERMGLFEGVWVCSFEEFKGLSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSM HHHCCHHHHHHEECHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHH QVNVIIEGFEQLRADLESEKRAMARIWKSREKQIDKVFEGTINMYGSIKGIAGNAIGQVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCE ALELGYDGEDLED EEEECCCCCCCCC >Mature Secondary Structure MQENQTRPFICPKCQEPIDVNEALYKQIEQENQNKFLAQQKEFEKEVNEKRAQYLSYFKN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEQKEETLKEREKEQQAKFDEAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDEKSKQVQELHQKEAEIERLKRENNEAESRLKAENEKKLNEKLDLEREKIEKALHEKNE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LKFKQQEEQLEMLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDCIEEIKKGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC RGGDCIQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSDMREIGADVGVIVSEALPKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MERMGLFEGVWVCSFEEFKGLSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSM HHHCCHHHHHHEECHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHH QVNVIIEGFEQLRADLESEKRAMARIWKSREKQIDKVFEGTINMYGSIKGIAGNAIGQVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCE ALELGYDGEDLED EEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA