| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645754
GI number: 15645754
Start: 1201436
End: 1202074
Strand: Reverse
Name: Not Available
Synonym: HP1140
Alternate gene names: 15645754
Gene position: 1202074-1201436 (Counterclockwise)
Preceding gene: 15645755
Following gene: 15645753
Centisome position: 72.07
GC content: 39.44
Gene sequence:
>639_bases ATGAGACAATGTGAAAAAAGGGTTTTTGATAGCCTGCCTTCCACGCAAACCTATCTTTTAGAAAAACTCAAAAGTAATGA ACTCAAAGCCCCCATTTTGATCGTGGCTAAAAACCAAAGCGCTGGGATAGGCAGTAGGGGGAATATTTGGGAGGGTGCAA AAAGCGCTTTGACTTTTTCGCTCGCTTTAAACGCAAGCGATTTGCCTAAAGATTTACCCATGCAAGCGAACGCTTTGTAT TTAGGGTTTTTATTCAAAGAAGTTTTAAAAGAGCTAGGCTCTCAAACCTGGCTTAAATGGCCTAACGACTTGTATTTAGA GGATCAAAAAATAGGGGGCGTGCTGGTTAATGTTTATAAAGACATGCGGGTGTGCGGCATTGGCGTGAATAGGGTTTCAA AGAAATGGGCATGTTTAGATATTGGTGCGAGCGATGGTTTGATTATAGAGGGCTTTTTAAAAAAAATAGAAGAAAATCTT TTTTGGGGGGAAGTTTTAAGTAAGTATGCGTTAGAATTTCATAGAAGCAACTCTTTTAGTTTCCATAATGATTGGGGCGA AGCGATGAGTTTGAAAGATGCGGAATTGTTAGAAGACGGCCGCATTTGTATTAAAGGTAAGATTTATGATAGGATGTGA
Upstream 100 bases:
>100_bases GTAGCGTGCGTATAGCAAGGTTGCAAGCGGTGGGTAAAAAGCCTTTGAAAGCGAAGGATTATTTGAATGGCAAGCGTTTG AAAATAGGCGGTATTTTGGC
Downstream 100 bases:
>100_bases GTATGATGAGTGAAATCATTGCGGTGGCTAATCAAAAAGGGGGTGTGGGCAAAACAACAACAGCGGTTAATTTAGCGGCT TCTTTAGCGGTGCATGAAAA
Product: biotin--protein ligase
Products: AMP; diphosphate; [acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
Alternate protein names: Biotin/Acetyl-CoA-Carboxylase Ligase; Biotin-[Acetyl-CoA-Carboxylase] Synthetase; Biotin-[Acetyl-CoA-Carboxylase] Ligase; Biotin Operon Repressor; Biotin-(Acetyl-CoA-Carboxylase) Ligase; Biotin-Acetyl-CoA-Carboxylase Ligase
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRQCEKRVFDSLPSTQTYLLEKLKSNELKAPILIVAKNQSAGIGSRGNIWEGAKSALTFSLALNASDLPKDLPMQANALY LGFLFKEVLKELGSQTWLKWPNDLYLEDQKIGGVLVNVYKDMRVCGIGVNRVSKKWACLDIGASDGLIIEGFLKKIEENL FWGEVLSKYALEFHRSNSFSFHNDWGEAMSLKDAELLEDGRICIKGKIYDRM
Sequences:
>Translated_212_residues MRQCEKRVFDSLPSTQTYLLEKLKSNELKAPILIVAKNQSAGIGSRGNIWEGAKSALTFSLALNASDLPKDLPMQANALY LGFLFKEVLKELGSQTWLKWPNDLYLEDQKIGGVLVNVYKDMRVCGIGVNRVSKKWACLDIGASDGLIIEGFLKKIEENL FWGEVLSKYALEFHRSNSFSFHNDWGEAMSLKDAELLEDGRICIKGKIYDRM >Mature_212_residues MRQCEKRVFDSLPSTQTYLLEKLKSNELKAPILIVAKNQSAGIGSRGNIWEGAKSALTFSLALNASDLPKDLPMQANALY LGFLFKEVLKELGSQTWLKWPNDLYLEDQKIGGVLVNVYKDMRVCGIGVNRVSKKWACLDIGASDGLIIEGFLKKIEENL FWGEVLSKYALEFHRSNSFSFHNDWGEAMSLKDAELLEDGRICIKGKIYDRM
Specific function: Bira Acts Both As A Biotin-Operon Repressor And As The Enzyme That Synthesizes The Corepressor, Acetyl-CoA:Carbon- Dioxide Ligase. This Protein Also Activates Biotin To Form Biotinyl-5'-Adenylate And Transfers The Biotin Moiety To Biotin-Accepting Protei
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.4.15
Molecular weight: Translated: 23929; Mature: 23929
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQCEKRVFDSLPSTQTYLLEKLKSNELKAPILIVAKNQSAGIGSRGNIWEGAKSALTFS CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEE LALNASDLPKDLPMQANALYLGFLFKEVLKELGSQTWLKWPNDLYLEDQKIGGVLVNVYK EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHEEHHH DMRVCGIGVNRVSKKWACLDIGASDGLIIEGFLKKIEENLFWGEVLSKYALEFHRSNSFS HHHHCCCCHHHHCCCEEEEEECCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC FHNDWGEAMSLKDAELLEDGRICIKGKIYDRM CCCCHHHHCCCCCHHHHCCCCEEEEEEECCCC >Mature Secondary Structure MRQCEKRVFDSLPSTQTYLLEKLKSNELKAPILIVAKNQSAGIGSRGNIWEGAKSALTFS CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEE LALNASDLPKDLPMQANALYLGFLFKEVLKELGSQTWLKWPNDLYLEDQKIGGVLVNVYK EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHEEHHH DMRVCGIGVNRVSKKWACLDIGASDGLIIEGFLKKIEENLFWGEVLSKYALEFHRSNSFS HHHHCCCCHHHHCCCEEEEEECCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC FHNDWGEAMSLKDAELLEDGRICIKGKIYDRM CCCCHHHHCCCCCHHHHCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; biotin; apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
Specific reaction: ATP + biotin + apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)] = AMP + diphosphate + [acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
General reaction: Amination; Carboxylic acid formation (carboxamide formation [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA