| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645753
GI number: 15645753
Start: 1200639
End: 1201433
Strand: Reverse
Name: Not Available
Synonym: HP1139
Alternate gene names: 15645753
Gene position: 1201433-1200639 (Counterclockwise)
Preceding gene: 15645754
Following gene: 15645752
Centisome position: 72.03
GC content: 40.0
Gene sequence:
>795_bases ATGATGAGTGAAATCATTGCGGTGGCTAATCAAAAAGGGGGTGTGGGCAAAACAACAACAGCGGTTAATTTAGCGGCTTC TTTAGCGGTGCATGAAAAAAAAATCTTGTTGATTGATTTTGACCCTCAAGCCAACGCCACTTCAAGCTTGGGTTTTAGGC GCGATAAAATTGATTATGATATTTATCATGTGTTGATTGGTCGTAAGCAAATTTCTCAAGTGATCTTAAAAACCCAAATG CCTTTTTTGGATCTAGTGCCTTCTAATTTGGGTTTAGCCGGGTTTGAAAAAACCTTTTATGATAGCCAAGATGAGAACAA ACGAGGCGAACTCATGCTTAAAAACGCCTTAGAGAGCGTGGTAGGGCTTTATGATTATATTATTATTGATTCCCCGCCAG CTCTAGGGCCTCTCACGATCAATTCGCTTTCAGCAGCCCATTCGGTGATCATTCCTATCCAATGCGAGTTCTTTGCCCTT GAAGGCACTAAATTATTGCTTAACACCATTAGAATGCTGCAAAAAAGCACGAACCCTAAGCTCAAAATCAGAGGTTTTTT ACCCACAATGCATGTCCCTCAACTCAATTTGACAAAAGGGGTTTTAGCGGAATTGTTCAAGTATTTTGACTCAGAATTTT TTAGAGATTCAGCTACAGGAGAGTATATTATGATCCCTAAAAGCGTGAAACTAGCGGAATCGCCTAGCTTTGGTAAGCCC ATCTTGCTCTATGATATTAAATCTAATGGCAGTATCGCTTATCAAAAATTAGCTCAAAGCATTCTTCAGGGGTAG
Upstream 100 bases:
>100_bases TCCATAATGATTGGGGCGAAGCGATGAGTTTGAAAGATGCGGAATTGTTAGAAGACGGCCGCATTTGTATTAAAGGTAAG ATTTATGATAGGATGTGAGT
Downstream 100 bases:
>100_bases TGATGGCAAAAAATAAAGTGTTGGGTAGGGGTTTAGCGGATATTTTCCCTGAAATCAATGAAGTGTATGAGCAGGGGCTG TATGAAAGAGCGAATCGGGT
Product: SpoOJ regulator (soj)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP ILLYDIKSNGSIAYQKLAQSILQG
Sequences:
>Translated_264_residues MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP ILLYDIKSNGSIAYQKLAQSILQG >Mature_264_residues MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP ILLYDIKSNGSIAYQKLAQSILQG
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29171; Mature: 29171
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYD CCCHHEEHHCCCCCCCCCHHHHHHHHHHEEECCEEEEEEECCCCCCCCCCCCCCCCCCHH IYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESV HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHH VGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPK HHHHHEEEECCCCCCCCEEECCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHCCCCC LKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCCCCCC ILLYDIKSNGSIAYQKLAQSILQG EEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYD CCCHHEEHHCCCCCCCCCHHHHHHHHHHEEECCEEEEEEECCCCCCCCCCCCCCCCCCHH IYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESV HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHH VGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPK HHHHHEEEECCCCCCCCEEECCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHCCCCC LKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCCCCCC ILLYDIKSNGSIAYQKLAQSILQG EEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]