| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645651
GI number: 15645651
Start: 1097475
End: 1098548
Strand: Reverse
Name: Not Available
Synonym: HP1037
Alternate gene names: 15645651
Gene position: 1098548-1097475 (Counterclockwise)
Preceding gene: 15645652
Following gene: 15645650
Centisome position: 65.87
GC content: 41.43
Gene sequence:
>1074_bases ATGAAAGGATTAGAAAGAGAATCGCATTTCACGCTCAATGAGAATGCGATGTTTTTTGAGTGTGCTTATAGTTGCGATAA CGCTTTGTTTTTGCAATTAGACGATCGCTCGTTTTTTATCACTGATTCTCGCTACACTCAAGAAGCTAAAGAAAGCGTTC AGCCTAAAAATGGCGTTTTAGCGGAAGTGGTAGAATCTAGCGATTTAGTGCAAAGCGCGATTGATTTGATTGTTAAAAGT TCGGTTAAAAAACTCTTTTTTGACCCCAATCAAGTGAATTTACAAACCTACAAGCGTTTAAATTCAGCGCTTGGGGATAA GGTTGCTTTAGAGGGCGTGCCTAGTTACCACCGCCAAAAACGCATCATTAAAAACGAGCATGAAATCCAACTTCTCAAAA AATCTCAAGCGCTGAATGTTGAAGCTTTTGAAAATTTTGCCGAGTATGTGAAAAAGATTTTTGATGAAAAAGAGTCGTTG AGCGAGCGGTATTTGCAGCATAAGGTTAAGGACTTTTTGACTAGAGAGGGGGTTTATGATCTGAGCTTTGAGCCTATTTT AGCCTTGAATGCGAACGCGAGCAAGCCCCATGCTTTGCCTAGTGCGAAGGATTTTTTAAAAGCGGAGCACAGCATTCTTT TGGATATGGGGATCAAATACGAACGCTATTGCTCTGATAGGACTCGCACGGCTTTTTTTGACCCTAAAGATTTTGTCTTT AAAAGAGAGCAGAGTTTCAAGGATAAAGAGCGTCAAAAGATTTATGACATTGTGAAAGAAGCGCAAGAAAAGGCTATTTC AGGCATTAGAGCGGGCATGACCGGTAAAGAAGCGGACAGCTTGGCTAGGGGAGTGATTAGCGATTATGGTTATGGGCAAT ATTTCACTCACAGCACCGGGCATGGCATTGGCTTAGACATCCATGAGCTTCCCTATATTTCATCGCGCAGTGAAACCATT TTAGAAGAGGGCATGGTGTTTTCTGTAGAGCCTGGGATTTATATCCCTGGGTTTTTTGGGGTGCGCATTGAAGATTTAGT GGTGATCAAAAATTCTAGGTCTGAGCTTTTGTGA
Upstream 100 bases:
>100_bases GCGATGGTCAATATTTTAGCCGAAATGAAAGCGTTCCAAGAAGCCCAAAAAAACAACCCTAATAACCCCATTAACAATCA AAAATAAAAGGGGGCTACCC
Downstream 100 bases:
>100_bases TGCGAGAGATCCTTACTAGCCGCTTTTTCCCTAGCCTTTTTAAAAAAAGGCTTGATTTTTCTAACAGGGTGGTTTTAGGG TTGGGATCTAATCTTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKGLERESHFTLNENAMFFECAYSCDNALFLQLDDRSFFITDSRYTQEAKESVQPKNGVLAEVVESSDLVQSAIDLIVKS SVKKLFFDPNQVNLQTYKRLNSALGDKVALEGVPSYHRQKRIIKNEHEIQLLKKSQALNVEAFENFAEYVKKIFDEKESL SERYLQHKVKDFLTREGVYDLSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF KREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDYGYGQYFTHSTGHGIGLDIHELPYISSRSETI LEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRSELL
Sequences:
>Translated_357_residues MKGLERESHFTLNENAMFFECAYSCDNALFLQLDDRSFFITDSRYTQEAKESVQPKNGVLAEVVESSDLVQSAIDLIVKS SVKKLFFDPNQVNLQTYKRLNSALGDKVALEGVPSYHRQKRIIKNEHEIQLLKKSQALNVEAFENFAEYVKKIFDEKESL SERYLQHKVKDFLTREGVYDLSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF KREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDYGYGQYFTHSTGHGIGLDIHELPYISSRSETI LEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRSELL >Mature_357_residues MKGLERESHFTLNENAMFFECAYSCDNALFLQLDDRSFFITDSRYTQEAKESVQPKNGVLAEVVESSDLVQSAIDLIVKS SVKKLFFDPNQVNLQTYKRLNSALGDKVALEGVPSYHRQKRIIKNEHEIQLLKKSQALNVEAFENFAEYVKKIFDEKESL SERYLQHKVKDFLTREGVYDLSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF KREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDYGYGQYFTHSTGHGIGLDIHELPYISSRSETI LEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRSELL
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI264681563, Length=257, Percent_Identity=27.2373540856031, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI11559925, Length=278, Percent_Identity=26.6187050359712, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI93141226, Length=250, Percent_Identity=28, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1788728, Length=324, Percent_Identity=32.4074074074074, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1789275, Length=310, Percent_Identity=25.4838709677419, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17509539, Length=361, Percent_Identity=25.7617728531856, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320922, Length=252, Percent_Identity=24.2063492063492, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321118, Length=252, Percent_Identity=23.015873015873, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 40797; Mature: 40797
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLERESHFTLNENAMFFECAYSCDNALFLQLDDRSFFITDSRYTQEAKESVQPKNGVL CCCCCCCCCEEECCCCEEEEEEECCCCEEEEEECCCEEEEECCHHHHHHHHHCCCCCCHH AEVVESSDLVQSAIDLIVKSSVKKLFFDPNQVNLQTYKRLNSALGDKVALEGVPSYHRQK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHH RIIKNEHEIQLLKKSQALNVEAFENFAEYVKKIFDEKESLSERYLQHKVKDFLTREGVYD HHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC LSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCEECCCCHHHHH KREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDYGYGQYFTHSTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCC HGIGLDIHELPYISSRSETILEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRSELL CCCCCCHHHCCCCCCCHHHHHHCCCEEEECCCEEECCCCCCEEEEEEEEECCHHCCC >Mature Secondary Structure MKGLERESHFTLNENAMFFECAYSCDNALFLQLDDRSFFITDSRYTQEAKESVQPKNGVL CCCCCCCCCEEECCCCEEEEEEECCCCEEEEEECCCEEEEECCHHHHHHHHHCCCCCCHH AEVVESSDLVQSAIDLIVKSSVKKLFFDPNQVNLQTYKRLNSALGDKVALEGVPSYHRQK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHH RIIKNEHEIQLLKKSQALNVEAFENFAEYVKKIFDEKESLSERYLQHKVKDFLTREGVYD HHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC LSFEPILALNANASKPHALPSAKDFLKAEHSILLDMGIKYERYCSDRTRTAFFDPKDFVF CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCEECCCCHHHHH KREQSFKDKERQKIYDIVKEAQEKAISGIRAGMTGKEADSLARGVISDYGYGQYFTHSTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCC HGIGLDIHELPYISSRSETILEEGMVFSVEPGIYIPGFFGVRIEDLVVIKNSRSELL CCCCCCHHHCCCCCCCHHHHHHCCCEEEECCCEEECCCCCCEEEEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]