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Identifier: 15645619

GI number: 15645619

Start: 1066053

End: 1066874

Strand: Reverse

Name: Not Available

Synonym: HP1004

Alternate gene names: NA

Gene position: 1066874-1066053 (Counterclockwise)

Preceding gene: 15645621

Following gene: 15645618

Centisome position: 63.97

GC content: 32.0

Gene sequence:

>822_bases
ATGGCGTTAGAAAAAAGTTATAGTAAAAACTTTGAAAGCGATGAGCTTTTTGATTATGAGATCATCAAGCCCAAAAAGAC
GCTTAAGATACAATACACTTATGCTAAACGCTACTATAAAGAAGTAGAAAAGTTTGCTAAAAATTTAACCCAACTGACAC
AAGAAGAATTCATGCGTTTAAGAGAGCCACAAAAACAAGTGGTCATCAAAAACATAGGCAATATGACACGCCTGCATTCA
AAAAGAGCGATGGATTATATCGCTAAACATGGTGAGCTAGTGAGAGATGAATTTTTTAATGAAGTTAATTATAATGACAT
AGCAGAGCAATGGAATGAGCAATTTGAAAAATTATTAGAAAATAAGAGCCGTGTTAAAAATTGCGCTTTACATCTAGTGT
TTAGCATTGATGAAAATTGTAATGAAAAAAATTTAAAAGCTTTGGAATTAAGCGTGTATCAAACACTCACTAACACGCTA
GGTTATGATTATCCTTTTATAATGAAACTCCATACACACCAAAACAATCCGCATGCGCATGTGATTATCAACAAAACTAA
CAAAATTACCAATAAGCAACTATGCTTTAATTCTAAAGACAGCTGTAAAGAGTTTTACCACACACTAAGAGAAACATTTA
AAGATTATTTATTTGCTAACTCAAAAGGCGAATTGCAATATTCTAACACGCCTAATATTTATAAGGCGATTAAAGACATA
GAAACAGAGCTAGATGCACTAGAAAACAGGCTAGAAACAATAAGAGTTTTAGGCATGAAAACTATTTTTATAAAGTTTTG
GGTAGTGCAACTTCTCAAATAG

Upstream 100 bases:

>100_bases
TGTTATCCTGCACTTTAAAAAGGGGGGATAATAGTGTTAGAATAAGGGCTAAGAAAGTTAAAACAAGCGAAAGTTTTTGG
GAGAATAAAATTACAATAAA

Downstream 100 bases:

>100_bases
AAAGTTTGAAAAAAAGAGAAAATGCCCTATTTGATCATTTAGATAGTCTAAAAAGTTTATTAGAAAAAACACATTGGGAA
AAAGAAAAATTCACGCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Relaxase

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MALEKSYSKNFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQVVIKNIGNMTRLHS
KRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLENKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTL
GYDYPFIMKLHTHQNNPHAHVIINKTNKITNKQLCFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI
ETELDALENRLETIRVLGMKTIFIKFWVVQLLK

Sequences:

>Translated_273_residues
MALEKSYSKNFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQVVIKNIGNMTRLHS
KRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLENKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTL
GYDYPFIMKLHTHQNNPHAHVIINKTNKITNKQLCFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI
ETELDALENRLETIRVLGMKTIFIKFWVVQLLK
>Mature_272_residues
ALEKSYSKNFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRLREPQKQVVIKNIGNMTRLHSK
RAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLENKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLG
YDYPFIMKLHTHQNNPHAHVIINKTNKITNKQLCFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDIE
TELDALENRLETIRVLGMKTIFIKFWVVQLLK

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32601; Mature: 32470

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEKSYSKNFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
CCCCCCHHCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH
HHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEE
VIINKTNKITNKQLCFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI
EEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH
ETELDALENRLETIRVLGMKTIFIKFWVVQLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ALEKSYSKNFESDELFDYEIIKPKKTLKIQYTYAKRYYKEVEKFAKNLTQLTQEEFMRL
CCCCCHHCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REPQKQVVIKNIGNMTRLHSKRAMDYIAKHGELVRDEFFNEVNYNDIAEQWNEQFEKLLE
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NKSRVKNCALHLVFSIDENCNEKNLKALELSVYQTLTNTLGYDYPFIMKLHTHQNNPHAH
HHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEE
VIINKTNKITNKQLCFNSKDSCKEFYHTLRETFKDYLFANSKGELQYSNTPNIYKAIKDI
EEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH
ETELDALENRLETIRVLGMKTIFIKFWVVQLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA