Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15645618

GI number: 15645618

Start: 1064965

End: 1066077

Strand: Reverse

Name: Not Available

Synonym: HP1003

Alternate gene names: NA

Gene position: 1066077-1064965 (Counterclockwise)

Preceding gene: 15645619

Following gene: 15645612

Centisome position: 63.92

GC content: 28.3

Gene sequence:

>1113_bases
TTGGGTAGTGCAACTTCTCAAATAGAAAGTTTGAAAAAAAGAGAAAATGCCCTATTTGATCATTTAGATAGTCTAAAAAG
TTTATTAGAAAAAACACATTGGGAAAAAGAAAAATTCACGCCCCCAATAAATGAAAAAGAACTTAATAGGCAACTTAAAG
AAGTGAGATGGTTCAATAAAGAAACTCCAACTTCTAAAAACACTTATAAGAAAATTCAAAAATTAGCTGTTTATAAAAGC
CCTTTAATAAAAGATTATCTTTATACCATTAAAAAACTTTTTGCCACACAAAAAAAGATTATAGATTTAGAAAAAAATTA
TAAAGATTTAAGAGCCTTAAAGGAAGAATTTAGCAAAGATTTAGAAACTGATTTATCCCATTCAAAAAAACGCTTTGAAC
TTTACACTAGACTAAAGAGCATGAGCAAAGTTTTTATAAGCAAAAGCATTGTTAAAAATTTAGAAAAAATTGCTTTAGAT
TTTAAAAGCGATAGACATAGTATTTCGCAAAGAGCTTTTGAATTTTTTAAGTATATGAATTATCAAAATTTAAGCTTGAC
TGATAAAGGCAATATGTTTTTAGTGGCTAAGTTTTTTAAAGATAGTGCTTTACTTGTTAATATTGCTAGGTTTGAAATGA
AAAAGATAGATGATAGTGTTAAAAATTCTAACCCACAAGACAATTTATTAGACAAACAAGTTTGGCTCAATCTTTTAGAG
CATTTAAAAAGACTTGAAGAGGAAAATTATTGTTTTGCTAAGAAACGAAAAGAATTCTTAGAGACTAGAGCGATGGAGCT
ATCAAAAGATTTAAAATTTTTAACACAGGCTAATGAAAATGATTTGCCCATTTATGAAAGAGGGCAAAGGGATAAAATCA
TTAAACGCTGTGAAAAATCGCTTAACTTTTTGCAGAAAGAATTACAATGCTTTAAAACCTTATTGAAAAGTGCAAGTATA
GCTTTAGAAAACTTGCAAAATAACCATCAAATCACAGCCGTTACACAAGACACGCAAGAAAACACAAACGCGCTCAAAAA
TACTACTCAAGATTTTAACAAAACTACCAATGAACCAACAAACCCTAACAATAACTATGGAATGGATTTTTAA

Upstream 100 bases:

>100_bases
TTTATAAGGCGATTAAAGACATAGAAACAGAGCTAGATGCACTAGAAAACAGGCTAGAAACAATAAGAGTTTTAGGCATG
AAAACTATTTTTATAAAGTT

Downstream 100 bases:

>100_bases
AACCATCCATAAAATTAAATAACTTTACTTAGCGTATTTTTTAACCAATTCTTCTAAAGTGAAACCCAAGCCTTTGTTAT
CATCTCTCAATTGCTCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MGSATSQIESLKKRENALFDHLDSLKSLLEKTHWEKEKFTPPINEKELNRQLKEVRWFNKETPTSKNTYKKIQKLAVYKS
PLIKDYLYTIKKLFATQKKIIDLEKNYKDLRALKEEFSKDLETDLSHSKKRFELYTRLKSMSKVFISKSIVKNLEKIALD
FKSDRHSISQRAFEFFKYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMKKIDDSVKNSNPQDNLLDKQVWLNLLE
HLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASI
ALENLQNNHQITAVTQDTQENTNALKNTTQDFNKTTNEPTNPNNNYGMDF

Sequences:

>Translated_370_residues
MGSATSQIESLKKRENALFDHLDSLKSLLEKTHWEKEKFTPPINEKELNRQLKEVRWFNKETPTSKNTYKKIQKLAVYKS
PLIKDYLYTIKKLFATQKKIIDLEKNYKDLRALKEEFSKDLETDLSHSKKRFELYTRLKSMSKVFISKSIVKNLEKIALD
FKSDRHSISQRAFEFFKYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMKKIDDSVKNSNPQDNLLDKQVWLNLLE
HLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASI
ALENLQNNHQITAVTQDTQENTNALKNTTQDFNKTTNEPTNPNNNYGMDF
>Mature_369_residues
GSATSQIESLKKRENALFDHLDSLKSLLEKTHWEKEKFTPPINEKELNRQLKEVRWFNKETPTSKNTYKKIQKLAVYKSP
LIKDYLYTIKKLFATQKKIIDLEKNYKDLRALKEEFSKDLETDLSHSKKRFELYTRLKSMSKVFISKSIVKNLEKIALDF
KSDRHSISQRAFEFFKYMNYQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMKKIDDSVKNSNPQDNLLDKQVWLNLLEH
LKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANENDLPIYERGQRDKIIKRCEKSLNFLQKELQCFKTLLKSASIA
LENLQNNHQITAVTQDTQENTNALKNTTQDFNKTTNEPTNPNNNYGMDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43782; Mature: 43650

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSATSQIESLKKRENALFDHLDSLKSLLEKTHWEKEKFTPPINEKELNRQLKEVRWFNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCC
ETPTSKNTYKKIQKLAVYKSPLIKDYLYTIKKLFATQKKIIDLEKNYKDLRALKEEFSKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETDLSHSKKRFELYTRLKSMSKVFISKSIVKNLEKIALDFKSDRHSISQRAFEFFKYMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMKKIDDSVKNSNPQDNLLDKQVWLNLLE
CCCCCEECCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANENDLPIYERGQRDKIIKRCEKS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
LNFLQKELQCFKTLLKSASIALENLQNNHQITAVTQDTQENTNALKNTTQDFNKTTNEPT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC
NPNNNYGMDF
CCCCCCCCCC
>Mature Secondary Structure 
GSATSQIESLKKRENALFDHLDSLKSLLEKTHWEKEKFTPPINEKELNRQLKEVRWFNK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCC
ETPTSKNTYKKIQKLAVYKSPLIKDYLYTIKKLFATQKKIIDLEKNYKDLRALKEEFSKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETDLSHSKKRFELYTRLKSMSKVFISKSIVKNLEKIALDFKSDRHSISQRAFEFFKYMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YQNLSLTDKGNMFLVAKFFKDSALLVNIARFEMKKIDDSVKNSNPQDNLLDKQVWLNLLE
CCCCCEECCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HLKRLEEENYCFAKKRKEFLETRAMELSKDLKFLTQANENDLPIYERGQRDKIIKRCEKS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
LNFLQKELQCFKTLLKSASIALENLQNNHQITAVTQDTQENTNALKNTTQDFNKTTNEPT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC
NPNNNYGMDF
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA