| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645569
GI number: 15645569
Start: 1012922
End: 1013488
Strand: Reverse
Name: Not Available
Synonym: HP0953
Alternate gene names: NA
Gene position: 1013488-1012922 (Counterclockwise)
Preceding gene: 15645570
Following gene: 15645566
Centisome position: 60.77
GC content: 39.33
Gene sequence:
>567_bases TTGTTTAAAAGAATGGTTTTAATCGCTCTTTTAGGGGTGTTTTCAAGCGTTTCATTAAGCGCTAAGAGTCTTTTAAGAGA TGATGGGATTTTAGTCTCTGATTTAAAGGGCATGAAATCAGAACTATCTGATGCTCCTGCTTGGGTTTTTGAAGACGCTA AAGCCCCCTACGAAGAAATGGGCGTGGCGTATATCCCTGTTAATAATAAATATTTAGGGATTGAGCAAGCGACCTTAAAC GCTAAATTGAGTCTGATCGTGGTTTTTCATGAAATCATGATGAAGTATAAAAAACGCTTCATGGAGCAATTCCATGAGTC CGAGCAGACGACTACGAATATCAGTTACGCTATCTATAATTATCTAGCGACTAAGATCCAGGTATCCAACACCTACACGA ATTTAAAATCGGAGGTGGCGGTGGTGAAAATCAAGCTAGTGGGTTGTCAGATTGAGCAAATCAAAAGGTATTTAAAAGCG AGCGTTGAAAACCTTAACGATAATGAAATCGCTTACATCGCTAAGGTCGCTCAAAAAGAATTTGGTAGCGTTTGTGCGTT AAGGTAG
Upstream 100 bases:
>100_bases AGAAAATCAAAAGTTGATGCGATTACTTGGTTGTGATTAAACAAAATCAAAAACTTTTTAACTATAATCAAACCTAAATT AAAGTTCAAGGAGTGGCATT
Downstream 100 bases:
>100_bases TTTTATAGCATTCTAGCGAGCATGTTTAAGGCATGCTCTACGCTTTTATTTTGAATGCTTTCTCTGTTCCCTTCAAAAAA ACAGCGATCGATTAAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MFKRMVLIALLGVFSSVSLSAKSLLRDDGILVSDLKGMKSELSDAPAWVFEDAKAPYEEMGVAYIPVNNKYLGIEQATLN AKLSLIVVFHEIMMKYKKRFMEQFHESEQTTTNISYAIYNYLATKIQVSNTYTNLKSEVAVVKIKLVGCQIEQIKRYLKA SVENLNDNEIAYIAKVAQKEFGSVCALR
Sequences:
>Translated_188_residues MFKRMVLIALLGVFSSVSLSAKSLLRDDGILVSDLKGMKSELSDAPAWVFEDAKAPYEEMGVAYIPVNNKYLGIEQATLN AKLSLIVVFHEIMMKYKKRFMEQFHESEQTTTNISYAIYNYLATKIQVSNTYTNLKSEVAVVKIKLVGCQIEQIKRYLKA SVENLNDNEIAYIAKVAQKEFGSVCALR >Mature_188_residues MFKRMVLIALLGVFSSVSLSAKSLLRDDGILVSDLKGMKSELSDAPAWVFEDAKAPYEEMGVAYIPVNNKYLGIEQATLN AKLSLIVVFHEIMMKYKKRFMEQFHESEQTTTNISYAIYNYLATKIQVSNTYTNLKSEVAVVKIKLVGCQIEQIKRYLKA SVENLNDNEIAYIAKVAQKEFGSVCALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21222; Mature: 21222
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRMVLIALLGVFSSVSLSAKSLLRDDGILVSDLKGMKSELSDAPAWVFEDAKAPYEEM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCEEECCCCCCHHHC GVAYIPVNNKYLGIEQATLNAKLSLIVVFHEIMMKYKKRFMEQFHESEQTTTNISYAIYN CEEEEECCCCEECEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLATKIQVSNTYTNLKSEVAVVKIKLVGCQIEQIKRYLKASVENLNDNEIAYIAKVAQKE HHHHHEEECCHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FGSVCALR HCCCCCCC >Mature Secondary Structure MFKRMVLIALLGVFSSVSLSAKSLLRDDGILVSDLKGMKSELSDAPAWVFEDAKAPYEEM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCEEECCCCCCHHHC GVAYIPVNNKYLGIEQATLNAKLSLIVVFHEIMMKYKKRFMEQFHESEQTTTNISYAIYN CEEEEECCCCEECEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLATKIQVSNTYTNLKSEVAVVKIKLVGCQIEQIKRYLKASVENLNDNEIAYIAKVAQKE HHHHHEEECCHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FGSVCALR HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA