| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645021
GI number: 15645021
Start: 403014
End: 403949
Strand: Reverse
Name: Not Available
Synonym: HP0393
Alternate gene names: 15645021
Gene position: 403949-403014 (Counterclockwise)
Preceding gene: 15645022
Following gene: 15645020
Centisome position: 24.22
GC content: 37.93
Gene sequence:
>936_bases ATGGCAGAAAAAACAGCTAACGATTTAAAACTAAGTGAGATAGAACTCGTGGATTTTCGTATTTATGGCATGCAAGAGGG CGTCCCTTATGAGGGGATTTATGGTATCAATGTGGCTAAAGTCCAAGAAATCATCCCCATGCCCACCCTTTTTGAATACC CCACGAATTTGGATTACATTATCGGCGTGTTTGATTTGCGCTCCATAATCATTCCGCTTATAGACTTGGCTAAATGGATA GGGATTATCCCAGATAAAAGCAAGGAAAACGAAAAAATCGTCATTATCACTGAATTTAACAACGTTAAAATGGGTTTTTT AGTCCATTCGGCTAGGCGTATCAGGCGCATTAGCTGGAAAGATGTGGAGCCTGCATCCTTTAGCGCCTCTAATAGCATCA ATAAAGAAAATATTACCGGCACGACACGCATTGAAAACGACAAAACCCTGCTCATTTTGGATTTAGAAAGCATTTTAGAC GATTTAAAGCTTAATGAAGACGCTAAAAACGCTAAAGATACCCATAAAGAGCGTTTTGAAGGCGAAGTGTTGTTTTTAGA CGATAGCAAGACCGCAAGAAAAACCTTAAAAAACCATTTGAGCAAATTAGGTTTTAGCATCACTGAAGCTGTGGATGGGG AAGACGGGTTGAACAAATTAGAAATGTTATTCAAAAAATACGGGGACGATTTGAGAAAGCATTTGAAATTCATTATTTCA GATGTTGAAATGCCTAAAATGGATGGCTATCATTTCTTATTCAAGCTCCAAAAAGACCCTAGGTTTGCTTATATTCCTGT GATTTTTAATTCTTCTATTTGCGATAATTACAGCGCTGAAAGGGCTAAAGAAATGGGGGCTGTAGCGTATTTAGTCAAGT TTGACGCAGAAAAATTCACCGAAGAAATTTCTAAGATTTTAGACAAGAATGCGTAA
Upstream 100 bases:
>100_bases GCCTATTTATTGCCCACTGCCTTCCTTTTATTACGAACAAAGCCTTTTTAAGGTATCATCAAGCGTTTTAGAACCATCTC AAAATAAGGACGCCTAAATC
Downstream 100 bases:
>100_bases TTCTTTTTATAAAATTGTAAAATACTCTTATCTCAAACGCTAAAAAGGGGTTTTAAATGGATGATTTGCAAGAAATAATG GAAGACTTCTTGATTGAAGC
Product: chemotaxis protein (cheV)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSIIIPLIDLAKWI GIIPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILD DLKLNEDAKNAKDTHKERFEGEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIIS DVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFTEEISKILDKNA
Sequences:
>Translated_311_residues MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSIIIPLIDLAKWI GIIPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILD DLKLNEDAKNAKDTHKERFEGEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIIS DVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFTEEISKILDKNA >Mature_310_residues AEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSIIIPLIDLAKWIG IIPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDD LKLNEDAKNAKDTHKERFEGEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIISD VEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFTEEISKILDKNA
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=128, Percent_Identity=35.9375, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 35630; Mature: 35499
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYI CCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCEECCHHHHHHHHCCCCCHHCCCCCCHHH IGVFDLRSIIIPLIDLAKWIGIIPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCC DVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDDLKLNEDAKNAKDTHKERFE CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHC GEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIIS CCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH DVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFT HCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHEEEEEEHHHHHHH EEISKILDKNA HHHHHHHCCCC >Mature Secondary Structure AEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYI CCCCCCCCEEEEEEEEEEEEEECCCCCCCCCEECCHHHHHHHHCCCCCHHCCCCCCHHH IGVFDLRSIIIPLIDLAKWIGIIPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCC DVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDDLKLNEDAKNAKDTHKERFE CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHC GEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIIS CCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH DVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFT HCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHEEEEEEHHHHHHH EEISKILDKNA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]