| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645022
GI number: 15645022
Start: 403953
End: 404711
Strand: Reverse
Name: Not Available
Synonym: HP0394
Alternate gene names: NA
Gene position: 404711-403953 (Counterclockwise)
Preceding gene: 15645023
Following gene: 15645021
Centisome position: 24.27
GC content: 36.23
Gene sequence:
>759_bases ATGCTAGAAACTTATGCACTTAAAAATGGGGCTGTTTTTATCTCTGATGCGCATTTTTTGCCCAAAAGCCCTCATTTAAT CCATACGCTTAAAGAACTTTTAAGCGCCAAACCCCCACAAGTCTTTTTCATGGGCGATATTTTCCATGTTCTTGTGGGCT ACTTGCCCCTAGACAAAGAGCAGCAAAAAATCATTGATTTAATCCATGCGTTAAGCGAAATTTCACAAGTCTTTTATTTT GAAGGCAACCATGATTTTTCCATGCGTTTTGTATTCAATTCTAAAGTAATGGTTTTTGAGCGCCAAAACCAGCCCGTATT ATTCCAATATGATAACAAACGCTTTTTACTAGCCCATGGGGATTTATTCATTACTAAAGCGTATGAATTTTACATCACGC AGCTCACTTCCACTTGGGCTAGATTTTTTTTAACTTTTTTAAATTTATTAAGTTTTAAAACCTTATACCCTCTTTTTAAA AAACTCATCTATCAAAAACCCGTCCGCCTTTGGGAATTAGAGCCAAAAGAGTTGCAATCTTTTATTGAAAAGCGCCTAAA AGCCTATCAAAACTATATTAAAGATCTTAACATTGGTAGCATTGACGGCATTATAGAGGGGCATTTTCATCTCAAAAGCG GTGCAAAAATCCCCTTGAATACGCCTATTTATTGCCCACTGCCTTCCTTTTATTACGAACAAAGCCTTTTTAAGGTATCA TCAAGCGTTTTAGAACCATCTCAAAATAAGGACGCCTAA
Upstream 100 bases:
>100_bases GCGAGCGTTCTTTCAATGGGCATGAGTGATGATTTTGAATTAGCGATTGCTTGCGGGGCGAATCTTTTAAGGATTGGCTC TTTTTTGTTCAAAGAGTAAG
Downstream 100 bases:
>100_bases ATCATGGCAGAAAAAACAGCTAACGATTTAAAACTAAGTGAGATAGAACTCGTGGATTTTCGTATTTATGGCATGCAAGA GGGCGTCCCTTATGAGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: UDP-2 3-Diacylglucosamine Hydrolase; Pyridine Nucleotide-Disulfide Oxidoreductase YkgC
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MLETYALKNGAVFISDAHFLPKSPHLIHTLKELLSAKPPQVFFMGDIFHVLVGYLPLDKEQQKIIDLIHALSEISQVFYF EGNHDFSMRFVFNSKVMVFERQNQPVLFQYDNKRFLLAHGDLFITKAYEFYITQLTSTWARFFLTFLNLLSFKTLYPLFK KLIYQKPVRLWELEPKELQSFIEKRLKAYQNYIKDLNIGSIDGIIEGHFHLKSGAKIPLNTPIYCPLPSFYYEQSLFKVS SSVLEPSQNKDA
Sequences:
>Translated_252_residues MLETYALKNGAVFISDAHFLPKSPHLIHTLKELLSAKPPQVFFMGDIFHVLVGYLPLDKEQQKIIDLIHALSEISQVFYF EGNHDFSMRFVFNSKVMVFERQNQPVLFQYDNKRFLLAHGDLFITKAYEFYITQLTSTWARFFLTFLNLLSFKTLYPLFK KLIYQKPVRLWELEPKELQSFIEKRLKAYQNYIKDLNIGSIDGIIEGHFHLKSGAKIPLNTPIYCPLPSFYYEQSLFKVS SSVLEPSQNKDA >Mature_252_residues MLETYALKNGAVFISDAHFLPKSPHLIHTLKELLSAKPPQVFFMGDIFHVLVGYLPLDKEQQKIIDLIHALSEISQVFYF EGNHDFSMRFVFNSKVMVFERQNQPVLFQYDNKRFLLAHGDLFITKAYEFYITQLTSTWARFFLTFLNLLSFKTLYPLFK KLIYQKPVRLWELEPKELQSFIEKRLKAYQNYIKDLNIGSIDGIIEGHFHLKSGAKIPLNTPIYCPLPSFYYEQSLFKVS SSVLEPSQNKDA
Specific function: Unknown
COG id: COG2908
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29507; Mature: 29507
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETYALKNGAVFISDAHFLPKSPHLIHTLKELLSAKPPQVFFMGDIFHVLVGYLPLDKE CCCCEEECCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCHH QQKIIDLIHALSEISQVFYFEGNHDFSMRFVFNSKVMVFERQNQPVLFQYDNKRFLLAHG HHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCEEEEEEECCCCEEEEECCCEEEEEEC DLFITKAYEFYITQLTSTWARFFLTFLNLLSFKTLYPLFKKLIYQKPVRLWELEPKELQS CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHH FIEKRLKAYQNYIKDLNIGSIDGIIEGHFHLKSGAKIPLNTPIYCPLPSFYYEQSLFKVS HHHHHHHHHHHHHHCCCCCCCCCEEECEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHH SSVLEPSQNKDA HHHCCCCCCCCC >Mature Secondary Structure MLETYALKNGAVFISDAHFLPKSPHLIHTLKELLSAKPPQVFFMGDIFHVLVGYLPLDKE CCCCEEECCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCHH QQKIIDLIHALSEISQVFYFEGNHDFSMRFVFNSKVMVFERQNQPVLFQYDNKRFLLAHG HHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCEEEEEEECCCCEEEEECCCEEEEEEC DLFITKAYEFYITQLTSTWARFFLTFLNLLSFKTLYPLFKKLIYQKPVRLWELEPKELQS CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHH FIEKRLKAYQNYIKDLNIGSIDGIIEGHFHLKSGAKIPLNTPIYCPLPSFYYEQSLFKVS HHHHHHHHHHHHHHCCCCCCCCCEEECEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHH SSVLEPSQNKDA HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA