| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645019
GI number: 15645019
Start: 400052
End: 400549
Strand: Reverse
Name: Not Available
Synonym: HP0391
Alternate gene names: 15645019
Gene position: 400549-400052 (Counterclockwise)
Preceding gene: 15645020
Following gene: 15645017
Centisome position: 24.02
GC content: 38.76
Gene sequence:
>498_bases GTGAGCAACCAATTAAAAGATTTATTTGAAAGACAAAAAGAAGCTAGTGCAGGCTCTAAACAAGAAGACAATGAAGAGGT TTTGCAATTCATTGGCTTTATTATTGGCGATGAAGAATACGCCATTCCCATTTTGAATATTTTAGAAATCGTCAAACCCA TTGGTTACACGCGAGTCCCTGAAACCCCAAACTATGTGCTTGGCGTGTTCAATTTAAGGGGTAATGTCTTTCCGTTGATT AGCTTGCGTTTAAAGTTTGGCTTGAAAGCTGAAAAACAAAACAAAGACACTCGTTATTTGGTGGTGCGACACAACGATCA GATCGCTGGGTTTTTCATCGATCGCTTAACTGAAGCCATTCGCATCAAGCAAACGGATATTGACCCAGTGCCAGAGACTT TGAGCGATAACAATAACTTAACTTATGGCATTGGGAAACAAAACGACAGACTCGTAACCATTTTAAGAGTGGAAGAAATC TTAAAAAAAGACTTCTAA
Upstream 100 bases:
>100_bases GCGTTGAATCCGGCATGACTGAATACATCACCAAACCTTATAGCGGTGAATATTTAACCACCGTAGTGAAGCGCAGCATT AAATTAGAAGGAGACCAATC
Downstream 100 bases:
>100_bases AAACCTTTTCTATCAAACCCTTATGGGTTTTGTGAAAGATTTATCCCGTTAAAAAGCTTAATTTTAATCAAGCGGTAATG TTTGATTCAAAACAGAGTTT
Product: purine-binding chemotaxis protein (cheW)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSNQLKDLFERQKEASAGSKQEDNEEVLQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLI SLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEI LKKDF
Sequences:
>Translated_165_residues MSNQLKDLFERQKEASAGSKQEDNEEVLQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLI SLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEI LKKDF >Mature_164_residues SNQLKDLFERQKEASAGSKQEDNEEVLQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLIS LRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEIL KKDF
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=153, Percent_Identity=31.3725490196078, Blast_Score=81, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18967; Mature: 18836
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQLKDLFERQKEASAGSKQEDNEEVLQFIGFIIGDEEYAIPILNILEIVKPIGYTRVP CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC ETPNYVLGVFNLRGNVFPLISLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAI CCCCEEEEEEECCCCEEHHEEEEHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH RIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEILKKDF HHCCCCCCCCCHHHCCCCCEEEECCCCCCCEEEHHHHHHHHHHCC >Mature Secondary Structure SNQLKDLFERQKEASAGSKQEDNEEVLQFIGFIIGDEEYAIPILNILEIVKPIGYTRVP CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC ETPNYVLGVFNLRGNVFPLISLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAI CCCCEEEEEEECCCCEEHHEEEEHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH RIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEILKKDF HHCCCCCCCCCHHHCCCCCEEEECCCCCCCEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]