| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644846
GI number: 15644846
Start: 227007
End: 227558
Strand: Reverse
Name: Not Available
Synonym: HP0218
Alternate gene names: 15644846
Gene position: 227558-227007 (Counterclockwise)
Preceding gene: 15644854
Following gene: 15644841
Centisome position: 13.64
GC content: 41.67
Gene sequence:
>552_bases ATGAAAACTTTTGAAGTAATGATTCAAACCGATTCGAAAGGGTATTTGGACGCTAAATTTGGCGGTAACGCTCCTAAAGC GTTTCTCAATTCAAACGGCTTACCCACTTATTCGCCTAAAATCTCATGGCAAAAAGTAGAAGGCGCTCAAAGCTATGCGT TAGAACTCATCGATCATGACGCTCAAAAAGTGTGTGGCATGCCGTTTGTCCATTGGGTCGTGGGCAATATTGCTCATAAT GTTTTAGAAGAAAACGCCTCCATGATGGATAAAAGGATTGTTCAAGGGGTCAATTCACTCACTCAAGGCTTTATCCGTTC TCCTCTTAATGAAAGCGAAAAACAACGCTCCAATCTCAATAACAGCGTCTATATCGGCCCCATGCCCCCTAATGGCGATC ACCATTATCTTATTCAAGTGTATGCCCTAGACATTCCTAAACTCGCCTTAAAAGCTCCTTTTTTCTTAGGCGATTTGCAT GACAAAATGCGCAACCATATCATCGCCATAGGGAGAAAGGAATTTTTATACAAGCAGTTTGTGAGGAAATAG
Upstream 100 bases:
>100_bases AAAATGATTATTCTAATACCATGCTTCAAATTAAGATGTATTTTTATGATCATGCTACAATAAGAGAACGCAAAACGATT TCAAAAAAAAAGGGCTTAAA
Downstream 100 bases:
>100_bases GTTGCATGCTTGCAGCTATCTTTCCGCTAAATTGAATTTTTGATACATCTCTAAAATTCTCTTTTCATCTAGCATGCTTT CTTCAATCTTTGTGCCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPFVHWVVGNIAHN VLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH DKMRNHIIAIGRKEFLYKQFVRK
Sequences:
>Translated_183_residues MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPFVHWVVGNIAHN VLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH DKMRNHIIAIGRKEFLYKQFVRK >Mature_183_residues MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPFVHWVVGNIAHN VLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH DKMRNHIIAIGRKEFLYKQFVRK
Specific function: Unknown
COG id: COG1881
COG function: function code R; Phospholipid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008914 - InterPro: IPR005247 [H]
Pfam domain/function: PF01161 PBP [H]
EC number: NA
Molecular weight: Translated: 20690; Mature: 20690
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHD CCCEEEEEEECCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH AQKVCGMPFVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC NSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRNHIIAIGRKEFLYKQF CCEEECCCCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHEEEECHHHHHHHHH VRK HCC >Mature Secondary Structure MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHD CCCEEEEEEECCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH AQKVCGMPFVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC NSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRNHIIAIGRKEFLYKQF CCEEECCCCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHEEEECHHHHHHHHH VRK HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8978088; 8969509; 9384377 [H]