Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15644744

GI number: 15644744

Start: 121002

End: 122888

Strand: Reverse

Name: Not Available

Synonym: HP0114

Alternate gene names: NA

Gene position: 122888-121002 (Counterclockwise)

Preceding gene: 15644745

Following gene: 15644741

Centisome position: 7.37

GC content: 37.04

Gene sequence:

>1887_bases
ATGATGGATATTTATCAAAAAAACTTGCAAGCTCTTTTCAAAAAAGACCCTCTTTTGTTCGCAAAACTCAAAGCCATTAA
AGAAAACAAAAAATACGAAGTGTTTTTAGGGAATGATAGTGCGAATTTCAACCTCTTAGATAAAGAAACAAACACGCCCT
TATTTGAAAAAAGCCCTCTAGATTCAAGCTTAGAGTTATACAAAAATAGCGAAAATTACATGCTTTATCCTTATTTGTAT
TATTTTGGCTTGGGTAATGGGGTGTTTTATCGCTTGCTTTTAGGTAATGAAAATTTAAAACGCTTGGTGGTCATTGAGCC
TGAAATAGAGATTATTTTCATTGTGTTGAATCTTTTGGATTTTTCCACTGAGATTTTAGAAAATCGTTTGATTTTATTGC
ATGCAAGTTTTTGCAATTACAACATGATCGCTTCATTATTTGATATGGATAAAAAGTCTCGTTTATACGCAAGAATGTAT
GACTTAAAACTTTTTAACGCTTATTATGAACGATACTCTCATCAAATAATAGGAATCAACCAGCATTTCACGCGTGCTTT
AGAGCATGGCGCTATTAGCGTAGGCAATGACGCTAAAGACGCGCTTATAGGCATCAAACAGCATGCCGCTAATTTGCCTG
AAGTCATCAAAAGCCCTAGTTTAGTGGATTTTGTGAGCGCTTTAAAAAACAGAGACACCGCTATTATTGTTTCAACCGGG
CCCAGTTTGAACAAGCAGCTCCCCCTTTTAAAAGAAATCGCTCCTTACGCCACGCTTTTTTGTATAGACGCTTCTTTCCC
TATTTTGGCTAAAGCCGGTATCAAGCCTGATATTGTGCTGTCTTTAGAAAGGGTGGATTTAACGGCGAAATTTTATGAAG
AAACCCCCTTAGATTTTCAAGAAGGCGTTATTTTTGCTCTGACTTCCATTGTGCATAAACGATTGATTCAAGCGATTAAA
AGGGGGGTTAAACAATTCAGCTTCCGCCCCTTTGGTTATACCAACCTTTTTGATTTGCACCAGTATGGTTATGTGGGCAT
AGGCATGAGCGCAGCGAACATGGCGTATGAATTAGTGGTGCATTCTCGTTTCAAAAGATGCGTGTTTATTGGGCAAGATT
TGAGCTTTTCACAAAGCGGTAACAGCCATGCTAGTGGGGCGATCTATGGCGATAGAGAGATCAAGCCTAAAAAAGATAAA
GACAAGATCTTTATAGAAAAATATGGGGGTAACGGGGAAGTAGAGACCACTTTAGTGTGGAAACTTTTCTTAGAATTTTT
TGAAAAAGATATTTTTAACACGCCCTATAAACTAGAAGTCATCAACGCTACTGAAGGGGGGGCTAGGATTAAAGGGGCTA
AAGAAATGCCTTTTAAAGAAGTGTGCGAAAAAATAGACAAATCCAAGCCAAAGCCTCCTATCAATCTCATTTATCCCACC
CAATCAGAACAGGCTAAAAATTTAAAGATCGCTAGGCAAAAATGCGAAGAGATCATCAAATACGCCAATGAGAAAAAAAC
TCAAGTTGAAGAAGTGTTTTTAAAGGTGGCAGAGTTTTTAGAAGAAGTGGAAAAGCTTCATGAAAAAAACAAATTAGAAG
AGTTGGATTTTAACAAATTAGAAAATTTGAGCGCTGAAATTGATAACATTAAAGAGCTTTTTGATGACAAGCGATTCAAT
TCGTATTTTATGGATGCGATACAATCTTACATCTTCCACCAGGAATTGCACATCGCTGAAATCGTGTGCAAGAAAACGAA
TAATGAAGACGAATTAAGGGCTAAGCAATTAGAATACATTTACGTGCACAAATACTGGCTTTTTAGTTTGGCGGGTGGGA
TTGATTGCGTGATAGAAGCGATCAAAATGGCTTTAAAAGAATGGTAA

Upstream 100 bases:

>100_bases
CGAATGCGGTGCAACAAAATGTCTTAAGGCTTTTACAATAACAGCCCTTTTAATTCAAAGGGGCGTTAGCCCTTTTTATC
AGTTATTTTTATAAGTTAGA

Downstream 100 bases:

>100_bases
AACCCCTTTTTAAGCGTATGTGTCTAGGCTGGAATAAATTTCAGGGATATTTTCGCCACTAGCAAGGTTTTTCTCAACTT
GGGATCTATCTTTAATCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: PseD Protein

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSENYMLYPYLY
YFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY
DLKLFNAYYERYSHQIIGINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK
RGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK
DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT
QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKLENLSAEIDNIKELFDDKRFN
SYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYVHKYWLFSLAGGIDCVIEAIKMALKEW

Sequences:

>Translated_628_residues
MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSENYMLYPYLY
YFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY
DLKLFNAYYERYSHQIIGINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK
RGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK
DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT
QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKLENLSAEIDNIKELFDDKRFN
SYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYVHKYWLFSLAGGIDCVIEAIKMALKEW
>Mature_628_residues
MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSENYMLYPYLY
YFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY
DLKLFNAYYERYSHQIIGINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK
RGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK
DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT
QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKLENLSAEIDNIKELFDDKRFN
SYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYVHKYWLFSLAGGIDCVIEAIKMALKEW

Specific function: Unknown

COG id: COG2604

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72402; Mature: 72402

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPL
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCC
DSSLELYKNSENYMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLD
CCHHHHHCCCCCEEEEEEHHHHCCCCCCEEEEEECCCCCCEEEEECCCCEEHHHHHHHHH
FSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQIIGIN
HHHHHHHCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECH
QHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
HHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCEEEEECC
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQ
CCCCCCCCHHHHHCCHHEEEEECCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCHH
EGVIFALTSIVHKRLIQAIKRGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHH
HSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFIEKYGGNGEVETTLVW
HHHHHHEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
KLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT
HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC
QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKL
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHH
ENLSAEIDNIKELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEE
YVHKYWLFSLAGGIDCVIEAIKMALKEW
EEHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPL
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCC
DSSLELYKNSENYMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLD
CCHHHHHCCCCCEEEEEEHHHHCCCCCCEEEEEECCCCCCEEEEECCCCEEHHHHHHHHH
FSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQIIGIN
HHHHHHHCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECH
QHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
HHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCEEEEECC
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQ
CCCCCCCCHHHHHCCHHEEEEECCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCHH
EGVIFALTSIVHKRLIQAIKRGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHH
HSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFIEKYGGNGEVETTLVW
HHHHHHEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
KLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT
HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC
QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKL
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHH
ENLSAEIDNIKELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEE
YVHKYWLFSLAGGIDCVIEAIKMALKEW
EEHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA