Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15644684

GI number: 15644684

Start: 52459

End: 53718

Strand: Reverse

Name: Not Available

Synonym: HP0053

Alternate gene names: NA

Gene position: 53718-52459 (Counterclockwise)

Preceding gene: 15644685

Following gene: 15644683

Centisome position: 3.22

GC content: 29.84

Gene sequence:

>1260_bases
ATGAAAGAGCAATCAATGATTGATTTTTTAAAACTTAGAGATTATGACATTAGAAAAACACAAAATGCGCGATGGATAGA
TCAAAAATGCACCCCTGATGTGTTGTCTCTTGTTGCTGATTGTATTTTAGAGTTTACGCAATGTAATATTGGAAAATCAT
TTTCTATTAGGGATATTTGGGATAGCCCTTACACCAATGAAAATGTTAAAATGATTTTTTCTAAACCTGATTTAAATTCT
GACTTTTCCATGCATGAATACGATAAGTTTTTTTCTCAGCCTATTAAATTATTAGCCTATAGCGGTATTTTATTTGAAAC
AAAAACTGGCAATAGAAATATTTATACCATACAAAACATAGAGCTATTAGAATATCTCATGCAAAGAGAAACAAACGCTT
TGAAATTCCTTATTTTATATATTCAAAAGGTATTAATGGATAGTGGGATTTATCCTTTATTTGACAACTTTTTACAAAAA
CAAGACACAGAAAGTTTTAAGCAACTAAAAGATGGTTTCACTCATTTTACTATCAATAACACAGCAATCAATAACGCTAC
GGAATGTTTTAGGATTTTTACTAAAATTATCAATCCTTTAGCTTTTTATTATGGTAAAAAAGGCACAAGAAAAGGGTATT
TGTCCAACACTATAATTACAAAAGATGAGCTTAATTATAATCGTATCAATTGGCGAGATATAGGAAAAGATAAAAATACC
ACCAGACAAGAATACGATCTTATAAACTCTAAAAGGATTGCTAATTCTAACTATCTTATTTCAAAAGCTAAGAAAGTGGT
GAAACGATATAATGATAGATTTAATAATTCTCTCTCTGAAGTAAAACAAGAAAAAGAAGAGTCGCAAGCCACACAAATAC
ACCATATTTTTCCCATCCAAGACTTTCCCATTATTGCTAACTATATAGAGAATCTTATCGCACTCACTCCTAATCAACAT
TTTATTTACGCCCACCCTAATAATCAAACCCGCTTGATTGATAAAGATTTTCAATATATCTGCTTATTAGCTAAAACGAC
CACAATTCTTAATGACACTCAAGGCGTATATGATTGGAATGATTATATTGTTGTGTTGAATATGGGCCTCAAAACAACTA
TCTTTTCTCAAGTCAAGAACGAATGGGAATTATTAAAAGTAATAGATGCTTTTTATTTTGATTTTAACAAGAGCAAAGAT
CCAAGTTGGTCATACTTGCTAGATAAAAACGATTTAAGAGCTTTCAAGCTAAAATTTTAA

Upstream 100 bases:

>100_bases
AATTTAGAGATTTTTATAAAATCGCTAGGAATTATCAAACGCGCACCTTAAATATTGATAGCATGAGTTGTTTTTGGTTT
GGAATTTTAAGGAGTAGCTT

Downstream 100 bases:

>100_bases
TAAGTTTTATTGAAACTGGCTATAAAAACCCGCTTGACTTATCTTATCCTTTTCTTAAGCCATGCTTTGTTCATAGCATT
CTAAAACCTTTAAACAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIWDSPYTNENVKMIFSKPDLNS
DFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNIELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQK
QDTESFKQLKDGFTHFTINNTAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT
TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQDFPIIANYIENLIALTPNQH
FIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWNDYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKD
PSWSYLLDKNDLRAFKLKF

Sequences:

>Translated_419_residues
MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIWDSPYTNENVKMIFSKPDLNS
DFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNIELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQK
QDTESFKQLKDGFTHFTINNTAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT
TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQDFPIIANYIENLIALTPNQH
FIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWNDYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKD
PSWSYLLDKNDLRAFKLKF
>Mature_419_residues
MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIWDSPYTNENVKMIFSKPDLNS
DFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNIELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQK
QDTESFKQLKDGFTHFTINNTAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT
TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQDFPIIANYIENLIALTPNQH
FIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWNDYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKD
PSWSYLLDKNDLRAFKLKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49557; Mature: 49557

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIW
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECC
DSPYTNENVKMIFSKPDLNSDFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNI
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCH
ELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQKQDTESFKQLKDGFTHFTINN
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEECC
TAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCC
TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQ
CHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCC
DFPIIANYIENLIALTPNQHFIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWN
CCHHHHHHHHHHHEECCCCEEEEECCCCCCEEECCCCEEEEEEEHHHHHHCCCCCCEECC
DYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKDPSWSYLLDKNDLRAFKLKF
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECC
>Mature Secondary Structure
MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIW
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECC
DSPYTNENVKMIFSKPDLNSDFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNI
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCH
ELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQKQDTESFKQLKDGFTHFTINN
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEECC
TAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCC
TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQ
CHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCC
DFPIIANYIENLIALTPNQHFIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWN
CCHHHHHHHHHHHEECCCCEEEEECCCCCCEEECCCCEEEEEEEHHHHHHCCCCCCEECC
DYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKDPSWSYLLDKNDLRAFKLKF
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA