| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618948
GI number: 15618948
Start: 1194070
End: 1194741
Strand: Reverse
Name: Not Available
Synonym: CPn1040
Alternate gene names: NA
Gene position: 1194741-1194070 (Counterclockwise)
Preceding gene: 15618949
Following gene: 15618947
Centisome position: 97.12
GC content: 40.33
Gene sequence:
>672_bases ATGTCTACAACCACAGTAAAACACTTTATCCACACAGCCTCTCGTTGGGAGCCCGTTCTCAAAGAGATCGTAGCTTCCAA CTATTGGCATGCACAATGGATAAATACCCTGTCCTTTTTAGAAAATAGTGGAGCAAAAAAAATCTCCGCAAGTGAACATC CTACGGAGGTAAAGGAAGAAGTTTTAAAACATGCTGCTGAAGAATTTCGTCATGGTCACTATCTAAAAACTCAGATTTCT AGAATCTCAGAGACTTCTCTCCCTGACTATACATCTAAAAATCTTCTGGGAGGCTTACTTACAAAATATTACCTCCATCT TCTAGATTTAAGGACGTGCCGAGTACTGGAAAATGAATACTCCCTATCGGGACAAACGTTAAAAACTGCAGCGTATATTT TAGTTACCTACGCAATCGAACTTCGTGCTTCTGAACTTTATCCTCTGTATCACGATATTCTGAAAGAAGCTCAAAGTAAA ATAACGGTAAAATCCATTATCTTAGAAGAGCAAGGCCATCTGCAAGAGATGGAACGTGAACTTAAAGATCTCCCCCACGG GGAGGAACTCTTAGGCTATGCTTGCCAATTCGAAGGGGAGCTTTGCTTGCAGTTTGTAGAGAGATTAGAACAAATGATCT TCGATCCTTCCTCGACTTTTACAAAGTTCTAG
Upstream 100 bases:
>100_bases TCCTTCTTCGTCCTTTAGGGAACACACTGTATGTGCTGCCCCCCTACTGTATCCAAGAAGAAGATCTCCGGATTATTTAT TCTCACCTACAGGATGCCCT
Downstream 100 bases:
>100_bases AATTTTTCTTAGACGACAAATCAGAAGTCAGGCAAATTACCTAAAAAAAAAGAGATAAGTTTGCTTTACAATGCTTACTT ATAAAGTTTCACCTTCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSTTTVKHFIHTASRWEPVLKEIVASNYWHAQWINTLSFLENSGAKKISASEHPTEVKEEVLKHAAEEFRHGHYLKTQIS RISETSLPDYTSKNLLGGLLTKYYLHLLDLRTCRVLENEYSLSGQTLKTAAYILVTYAIELRASELYPLYHDILKEAQSK ITVKSIILEEQGHLQEMERELKDLPHGEELLGYACQFEGELCLQFVERLEQMIFDPSSTFTKF
Sequences:
>Translated_223_residues MSTTTVKHFIHTASRWEPVLKEIVASNYWHAQWINTLSFLENSGAKKISASEHPTEVKEEVLKHAAEEFRHGHYLKTQIS RISETSLPDYTSKNLLGGLLTKYYLHLLDLRTCRVLENEYSLSGQTLKTAAYILVTYAIELRASELYPLYHDILKEAQSK ITVKSIILEEQGHLQEMERELKDLPHGEELLGYACQFEGELCLQFVERLEQMIFDPSSTFTKF >Mature_222_residues STTTVKHFIHTASRWEPVLKEIVASNYWHAQWINTLSFLENSGAKKISASEHPTEVKEEVLKHAAEEFRHGHYLKTQISR ISETSLPDYTSKNLLGGLLTKYYLHLLDLRTCRVLENEYSLSGQTLKTAAYILVTYAIELRASELYPLYHDILKEAQSKI TVKSIILEEQGHLQEMERELKDLPHGEELLGYACQFEGELCLQFVERLEQMIFDPSSTFTKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25767; Mature: 25635
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTVKHFIHTASRWEPVLKEIVASNYWHAQWINTLSFLENSGAKKISASEHPTEVKEE CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VLKHAAEEFRHGHYLKTQISRISETSLPDYTSKNLLGGLLTKYYLHLLDLRTCRVLENEY HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSGQTLKTAAYILVTYAIELRASELYPLYHDILKEAQSKITVKSIILEEQGHLQEMERE CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LKDLPHGEELLGYACQFEGELCLQFVERLEQMIFDPSSTFTKF HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure STTTVKHFIHTASRWEPVLKEIVASNYWHAQWINTLSFLENSGAKKISASEHPTEVKEE CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VLKHAAEEFRHGHYLKTQISRISETSLPDYTSKNLLGGLLTKYYLHLLDLRTCRVLENEY HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSGQTLKTAAYILVTYAIELRASELYPLYHDILKEAQSKITVKSIILEEQGHLQEMERE CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LKDLPHGEELLGYACQFEGELCLQFVERLEQMIFDPSSTFTKF HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA