Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is 15606545

Identifier: 15606545

GI number: 15606545

Start: 957037

End: 957741

Strand: Direct

Name: 15606545

Synonym: aq_1345

Alternate gene names: NA

Gene position: 957037-957741 (Clockwise)

Preceding gene: 15606538

Following gene: 15606546

Centisome position: 61.69

GC content: 46.67

Gene sequence:

>705_bases
GTGATGGGACTTTTAAAGAGGCTTTTGAGAGTTGTAAGGGCGGAAGCCCATTCGGTTGTAGAAAAGCTTGAGGACCCTAT
AAAAATAACCGAAGAGGGATTGAGGGAACTCAGGAAGCAGTTAAAAGAGGCTATGGAAGCCTTGGCACAGGTAAAGGCAA
GCCAGATAAGGTTTGAGAGGGAAGCCAGAAACGAAAAGGAAAGGGCCAAGGCACTCGTGAAGAAAGCCGAAAGCCTTTTA
CTCCAAGCACAGGAAGGAAAGATATCACCCGAAGAGGCAGAAAAACTCGCCGCGGAACTCATCCAGAAGGCTGAACTCCA
CGAAAAAAACGCAAGAAGACTGGAAGAAGAGGCAAAGAGACAGAGGGAAATGGCGGTTAAACTTCAGGCAAAGATTGACG
AGCTCAAGGTCCAGATCGCAAAGTACGAGGCCGAACTAAAAACACTAAAGGCGAGACTCGCTACCGCAAGAGCGGTAAAA
AAGGTAAACAAGCAAATTGCGAAAGTTGACCCTTCCGATACGATAGCCATGCTCGAGAGAATGAAGGAAAAGGTAGAAGA
AGAAGAGACGCTTGCACAGGCTTACGAGGAACTTGCAAAACAGGAAGTAGCACTGGACGTGGAAAGCGAAGCGGAAAAGA
AGTTAAAGGAAGTGGAGAGTAAACAGAAGTTAGAAGAATTGAAGAAGAGACTCGGTCTTTCCTGA

Upstream 100 bases:

>100_bases
ATACCTTCGATTACGAGGAACTCGAAGCGAGTATATCCTCACTTGAGATATTTTTCGCAGAGTGGGGAGACGAGCTTTTA
AATATCCTGAAGGAGGCTAA

Downstream 100 bases:

>100_bases
GATGGGATTTCTTGAGAGGATAAAGAAACTCTTTTCGAAGGAAGAAGAAAAGCAGGAAGAAAGCATTCTCTCCAATCCTC
TGGAAAGACTGAAAAAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: PspA/IM30 Family Protein; Phage Shock Protein A Pspa

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFEREARNEKERAKALVKKAESLL
LQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKRQREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVK
KVNKQIAKVDPSDTIAMLERMKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS

Sequences:

>Translated_234_residues
MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFEREARNEKERAKALVKKAESLL
LQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKRQREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVK
KVNKQIAKVDPSDTIAMLERMKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS
>Mature_234_residues
MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFEREARNEKERAKALVKKAESLL
LQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKRQREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVK
KVNKQIAKVDPSDTIAMLERMKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26840; Mature: 26840

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARNEKERAKALVKKAESLLLQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVKKVNKQIAKVDPSDTIAMLER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMGLLKRLLRVVRAEAHSVVEKLEDPIKITEEGLRELRKQLKEAMEALAQVKASQIRFER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARNEKERAKALVKKAESLLLQAQEGKISPEEAEKLAAELIQKAELHEKNARRLEEEAKR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QREMAVKLQAKIDELKVQIAKYEAELKTLKARLATARAVKKVNKQIAKVDPSDTIAMLER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MKEKVEEEETLAQAYEELAKQEVALDVESEAEKKLKEVESKQKLEELKKRLGLS
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA