| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is cds
Identifier: 15606476
GI number: 15606476
Start: 880975
End: 881754
Strand: Direct
Name: cds
Synonym: aq_1249
Alternate gene names: 15606476
Gene position: 880975-881754 (Clockwise)
Preceding gene: 15606475
Following gene: 15606477
Centisome position: 56.79
GC content: 37.05
Gene sequence:
>780_bases TTGAGGATTACTCAAGGAGAAAGAGAAAGTTCGGGAGAGTTCTTGATGAGTAGAGAATTTTACGGCGTGCTTATAGGCGT AACGACACTTCTTGTTATCTTCTTACCGAAATCTTTATTCCTTTTAGTGATTTTGTTCTTGTGTTTTGCCATATCTAGAG AAGTATCGGTAGCTTTGGGAGAAAATGAGGTATTTTATTTCTCACCTTTAGTTTTATTGACTTATTACTTTGCCGATCCA CTTGTCTTTCCGTTAATAGGTTTACTGTCTCTTTATTTTGCCTACAAAAGGTGGGAACTAAATTCTTTTTTTAAATCAAC TTTTTTGCTTTTTTATCCCGCCCTTTTTCTTGTTTACCTGATAAAAATAAAGGAAATCTCAACTTATTACTTGCTAATTT TTATTTTCGGAATTTGGATAAACGACGTTTTTGCTTACTATATAGGGAAAAACTTCGGGAAAACTCCTCTCTTTCCAAAA ATTTCTCCGAAGAAAACTGTGGAAGGATTCCTCGGTGGAGTATTATTCGGGAGTTTATTCTTTGCCCTCACTTTGCCCTA TGGAATTTTAAACTCTTTCCTTTTAGGTACTTTTGTACTTACGGTAGGTGTAGCGGGGGACTACTTTAAGTCCTTCATAA AGAGGCAGGTTGGGATTAAGGACTTTTCAAACGTTTTTGGTGAACACGGCGGCTTTACGGACCGCTTTGACGCCCTTGTT TTTTCCGCTCCCGTGTTTTACCTTATAATGTGTGCTGGGGAGCTTAATTGTAAACTTTAA
Upstream 100 bases:
>100_bases AGGATTTCCAACTTCCTCCTATGGAACCTGGCGTACACGGAGCTTTACTTTACTGATACACTCTGGCCCGATTTCACGAG AGAAGAATTTATGAAAGCCC
Downstream 100 bases:
>100_bases ACTCTTCTCAGCGGGAGGGGCAATTATGGAAGTATTCAGCCGTTCCTTTAAGAACGGAGAAGAAATTCCAAAAGTTTACA CATGTGACGGTAAAGACATA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALGENEVFYFSPLVLLTYYFADP LVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYLIKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPK ISPKKTVEGFLGGVLFGSLFFALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV FSAPVFYLIMCAGELNCKL
Sequences:
>Translated_259_residues MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALGENEVFYFSPLVLLTYYFADP LVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYLIKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPK ISPKKTVEGFLGGVLFGSLFFALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV FSAPVFYLIMCAGELNCKL >Mature_259_residues MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALGENEVFYFSPLVLLTYYFADP LVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYLIKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPK ISPKKTVEGFLGGVLFGSLFFALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV FSAPVFYLIMCAGELNCKL
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family
Homologues:
Organism=Escherichia coli, GI1787677, Length=111, Percent_Identity=41.4414414414414, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI87081696, Length=125, Percent_Identity=36, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CDSA_AQUAE (O67292)
Other databases:
- EMBL: AE000657 - PIR: A70408 - RefSeq: NP_213856.1 - GeneID: 1192730 - GenomeReviews: AE000657_GR - KEGG: aae:aq_1249 - NMPDR: fig|224324.1.peg.871 - HOGENOM: HBG732679 - OMA: LSEWYNM - ProtClustDB: CLSK2299630 - BioCyc: AAEO224324:AQ_1249-MONOMER - BRENDA: 2.7.7.41 - InterPro: IPR000374
Pfam domain/function: PF01148 CTP_transf_1
EC number: =2.7.7.41
Molecular weight: Translated: 29486; Mature: 29486
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd93084c)-; HASH(0xcc05118)-; HASH(0xdc63c7c)-; HASH(0xcbb9c74)-; HASH(0xd81e6f0)-; HASH(0xda62578)-; HASH(0xc1f2554)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC ENEVFYFSPLVLLTYYFADPLVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYL CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPKISPKKTVEGFLGGVLFGSLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH FSAPVFYLIMCAGELNCKL HHHHHHHHHHHCCCCCCCH >Mature Secondary Structure MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC ENEVFYFSPLVLLTYYFADPLVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYL CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPKISPKKTVEGFLGGVLFGSLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH FSAPVFYLIMCAGELNCKL HHHHHHHHHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320