Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is cds

Identifier: 15606476

GI number: 15606476

Start: 880975

End: 881754

Strand: Direct

Name: cds

Synonym: aq_1249

Alternate gene names: 15606476

Gene position: 880975-881754 (Clockwise)

Preceding gene: 15606475

Following gene: 15606477

Centisome position: 56.79

GC content: 37.05

Gene sequence:

>780_bases
TTGAGGATTACTCAAGGAGAAAGAGAAAGTTCGGGAGAGTTCTTGATGAGTAGAGAATTTTACGGCGTGCTTATAGGCGT
AACGACACTTCTTGTTATCTTCTTACCGAAATCTTTATTCCTTTTAGTGATTTTGTTCTTGTGTTTTGCCATATCTAGAG
AAGTATCGGTAGCTTTGGGAGAAAATGAGGTATTTTATTTCTCACCTTTAGTTTTATTGACTTATTACTTTGCCGATCCA
CTTGTCTTTCCGTTAATAGGTTTACTGTCTCTTTATTTTGCCTACAAAAGGTGGGAACTAAATTCTTTTTTTAAATCAAC
TTTTTTGCTTTTTTATCCCGCCCTTTTTCTTGTTTACCTGATAAAAATAAAGGAAATCTCAACTTATTACTTGCTAATTT
TTATTTTCGGAATTTGGATAAACGACGTTTTTGCTTACTATATAGGGAAAAACTTCGGGAAAACTCCTCTCTTTCCAAAA
ATTTCTCCGAAGAAAACTGTGGAAGGATTCCTCGGTGGAGTATTATTCGGGAGTTTATTCTTTGCCCTCACTTTGCCCTA
TGGAATTTTAAACTCTTTCCTTTTAGGTACTTTTGTACTTACGGTAGGTGTAGCGGGGGACTACTTTAAGTCCTTCATAA
AGAGGCAGGTTGGGATTAAGGACTTTTCAAACGTTTTTGGTGAACACGGCGGCTTTACGGACCGCTTTGACGCCCTTGTT
TTTTCCGCTCCCGTGTTTTACCTTATAATGTGTGCTGGGGAGCTTAATTGTAAACTTTAA

Upstream 100 bases:

>100_bases
AGGATTTCCAACTTCCTCCTATGGAACCTGGCGTACACGGAGCTTTACTTTACTGATACACTCTGGCCCGATTTCACGAG
AGAAGAATTTATGAAAGCCC

Downstream 100 bases:

>100_bases
ACTCTTCTCAGCGGGAGGGGCAATTATGGAAGTATTCAGCCGTTCCTTTAAGAACGGAGAAGAAATTCCAAAAGTTTACA
CATGTGACGGTAAAGACATA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALGENEVFYFSPLVLLTYYFADP
LVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYLIKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPK
ISPKKTVEGFLGGVLFGSLFFALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV
FSAPVFYLIMCAGELNCKL

Sequences:

>Translated_259_residues
MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALGENEVFYFSPLVLLTYYFADP
LVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYLIKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPK
ISPKKTVEGFLGGVLFGSLFFALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV
FSAPVFYLIMCAGELNCKL
>Mature_259_residues
MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALGENEVFYFSPLVLLTYYFADP
LVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYLIKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPK
ISPKKTVEGFLGGVLFGSLFFALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV
FSAPVFYLIMCAGELNCKL

Specific function: Unknown

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family

Homologues:

Organism=Escherichia coli, GI1787677, Length=111, Percent_Identity=41.4414414414414, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI87081696, Length=125, Percent_Identity=36, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CDSA_AQUAE (O67292)

Other databases:

- EMBL:   AE000657
- PIR:   A70408
- RefSeq:   NP_213856.1
- GeneID:   1192730
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_1249
- NMPDR:   fig|224324.1.peg.871
- HOGENOM:   HBG732679
- OMA:   LSEWYNM
- ProtClustDB:   CLSK2299630
- BioCyc:   AAEO224324:AQ_1249-MONOMER
- BRENDA:   2.7.7.41
- InterPro:   IPR000374

Pfam domain/function: PF01148 CTP_transf_1

EC number: =2.7.7.41

Molecular weight: Translated: 29486; Mature: 29486

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd93084c)-; HASH(0xcc05118)-; HASH(0xdc63c7c)-; HASH(0xcbb9c74)-; HASH(0xd81e6f0)-; HASH(0xda62578)-; HASH(0xc1f2554)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MRITQGERESSGEFLMSREFYGVLIGVTTLLVIFLPKSLFLLVILFLCFAISREVSVALG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
ENEVFYFSPLVLLTYYFADPLVFPLIGLLSLYFAYKRWELNSFFKSTFLLFYPALFLVYL
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKIKEISTYYLLIFIFGIWINDVFAYYIGKNFGKTPLFPKISPKKTVEGFLGGVLFGSLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FALTLPYGILNSFLLGTFVLTVGVAGDYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH
FSAPVFYLIMCAGELNCKL
HHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320