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The map label for this gene is ybcL [C]

Identifier: 15606477

GI number: 15606477

Start: 881726

End: 882241

Strand: Direct

Name: ybcL [C]

Synonym: aq_1250

Alternate gene names: 15606477

Gene position: 881726-882241 (Clockwise)

Preceding gene: 15606476

Following gene: 15606479

Centisome position: 56.84

GC content: 46.32

Gene sequence:

>516_bases
GTGCTGGGGAGCTTAATTGTAAACTTTAAACTCTTCTCAGCGGGAGGGGCAATTATGGAAGTATTCAGCCGTTCCTTTAA
GAACGGAGAAGAAATTCCAAAAGTTTACACATGTGACGGTAAAGACATATCACCTCATATAGGCTGGGAGGATGTTCCCG
AAGGAACGAAAAGCTTCGTCCTGATAATGGATGACCCTGACGCTCCTATCGGAACTTTTACCCATTGGGTTGTTTACGAC
ATACCTTCCCAAACCAGAGAGTTACTTGAAGACTTTCCGAAAGTTCCGGAGGTGAGCGGGATAAAGCAGGGAATTAACGA
CTTTGGGAGAGTAGGCTATGGAGGGCCATGTCCTCCCAGAGGTCACGGCTATCACAGGTACTTCTTCAAAGTCTTTGCCC
TGAGCGTGGAGAGCTTAGGACTTCCTCCGGGAGCAAGCAGAAAAGATGTTGAGTTAAAAATGAACGGGAAAATCCTCGCA
CAGGCTCACATAATAGGGCTCTACAAAAGAGATTAA

Upstream 100 bases:

>100_bases
GGGATTAAGGACTTTTCAAACGTTTTTGGTGAACACGGCGGCTTTACGGACCGCTTTGACGCCCTTGTTTTTTCCGCTCC
CGTGTTTTACCTTATAATGT

Downstream 100 bases:

>100_bases
TTCCTTTAAAGGAAACCTCGGATATTCTTTTACAAGTTCTCCTTCTTCGTTGAATATCATAGTGCTCGGCAAAAAGACGA
GTTTTACGAGTTCCGTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLGSLIVNFKLFSAGGAIMEVFSRSFKNGEEIPKVYTCDGKDISPHIGWEDVPEGTKSFVLIMDDPDAPIGTFTHWVVYD
IPSQTRELLEDFPKVPEVSGIKQGINDFGRVGYGGPCPPRGHGYHRYFFKVFALSVESLGLPPGASRKDVELKMNGKILA
QAHIIGLYKRD

Sequences:

>Translated_171_residues
MLGSLIVNFKLFSAGGAIMEVFSRSFKNGEEIPKVYTCDGKDISPHIGWEDVPEGTKSFVLIMDDPDAPIGTFTHWVVYD
IPSQTRELLEDFPKVPEVSGIKQGINDFGRVGYGGPCPPRGHGYHRYFFKVFALSVESLGLPPGASRKDVELKMNGKILA
QAHIIGLYKRD
>Mature_171_residues
MLGSLIVNFKLFSAGGAIMEVFSRSFKNGEEIPKVYTCDGKDISPHIGWEDVPEGTKSFVLIMDDPDAPIGTFTHWVVYD
IPSQTRELLEDFPKVPEVSGIKQGINDFGRVGYGGPCPPRGHGYHRYFFKVFALSVESLGLPPGASRKDVELKMNGKILA
QAHIIGLYKRD

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family

Homologues:

Organism=Escherichia coli, GI1786757, Length=180, Percent_Identity=37.7777777777778, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1786990, Length=159, Percent_Identity=39.622641509434, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1250_AQUAE (O67293)

Other databases:

- EMBL:   AE000657
- PIR:   B70408
- RefSeq:   NP_213857.1
- ProteinModelPortal:   O67293
- SMR:   O67293
- GeneID:   1192731
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_1250
- NMPDR:   fig|224324.1.peg.872
- HOGENOM:   HBG649023
- OMA:   HTGEAEN
- PhylomeDB:   O67293
- ProtClustDB:   CLSK2299631
- BioCyc:   AAEO224324:AQ_1250-MONOMER
- InterPro:   IPR008914
- InterPro:   IPR005247
- Gene3D:   G3DSA:3.90.280.10
- TIGRFAMs:   TIGR00481

Pfam domain/function: PF01161 PBP; SSF49777 PEBP

EC number: NA

Molecular weight: Translated: 18917; Mature: 18917

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSLIVNFKLFSAGGAIMEVFSRSFKNGEEIPKVYTCDGKDISPHIGWEDVPEGTKSFV
CCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
LIMDDPDAPIGTFTHWVVYDIPSQTRELLEDFPKVPEVSGIKQGINDFGRVGYGGPCPPR
EEECCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GHGYHRYFFKVFALSVESLGLPPGASRKDVELKMNGKILAQAHIIGLYKRD
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEEEEEEEEECC
>Mature Secondary Structure
MLGSLIVNFKLFSAGGAIMEVFSRSFKNGEEIPKVYTCDGKDISPHIGWEDVPEGTKSFV
CCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
LIMDDPDAPIGTFTHWVVYDIPSQTRELLEDFPKVPEVSGIKQGINDFGRVGYGGPCPPR
EEECCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GHGYHRYFFKVFALSVESLGLPPGASRKDVELKMNGKILAQAHIIGLYKRD
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320