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The map label for this gene is rpiB [H]

Identifier: 15606395

GI number: 15606395

Start: 795750

End: 796214

Strand: Direct

Name: rpiB [H]

Synonym: aq_1138

Alternate gene names: 15606395

Gene position: 795750-796214 (Clockwise)

Preceding gene: 15606394

Following gene: 15606396

Centisome position: 51.29

GC content: 45.81

Gene sequence:

>465_bases
ATGAAGATAGCTATCGGTTCGGATCACGCGGGATTTCCTCTAAAGGAAAAGATAAAGGAATTTTTAAAGGGAGAAGGGCA
CAAGGTTATAGACGTAGGAACTCACGCTCAGGAGTCCACCCACTACCCTATATACGCAAAAGAGGTCGTAAGGGCTATAA
GGAGCGGAAAAGCTGAAAGGGGAATACTCATATGCGGAACAGGAATAGGCATGTCCATTACAGCAAACAAGTTCAGGGGC
ATAAGGGCGGCACTTTGCACGAACGAGTACATGGCACGCATGAGCAGACTACACAACGATGCAAACGTCTTGTGCTTGGG
AGAGAGAGTTCTCGGAGTTGAACTCGCCCTTTCCATAGTAAAAGTTTGGCTGGAAACACCTTTCGAAGGGGGAAGGCACT
TAAAGAGACTCGAGATAATATCAGAGATAGAAGATGAAATTTGCGGAGAAAATATACCCCGATAA

Upstream 100 bases:

>100_bases
TCGAGCATAAAGACTACCGTGGAGACTTATTACAAGTTCAGTCAAAAGAGGGCACAGGAACTCGTAAGGAACTTCCTCTT
TTCGCAGTAAAATCGTATTT

Downstream 100 bases:

>100_bases
AGTTATCCTTACGCTCCTGTTCGTGTTCTTTCTCCTCTCCCAAACCTTTGTGTTTATAAAAAACGTTGTTCCCCTTCTCG
TTCAGTACAACCCCTACGCT

Product: ribose 5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKIAIGSDHAGFPLKEKIKEFLKGEGHKVIDVGTHAQESTHYPIYAKEVVRAIRSGKAERGILICGTGIGMSITANKFRG
IRAALCTNEYMARMSRLHNDANVLCLGERVLGVELALSIVKVWLETPFEGGRHLKRLEIISEIEDEICGENIPR

Sequences:

>Translated_154_residues
MKIAIGSDHAGFPLKEKIKEFLKGEGHKVIDVGTHAQESTHYPIYAKEVVRAIRSGKAERGILICGTGIGMSITANKFRG
IRAALCTNEYMARMSRLHNDANVLCLGERVLGVELALSIVKVWLETPFEGGRHLKRLEIISEIEDEICGENIPR
>Mature_154_residues
MKIAIGSDHAGFPLKEKIKEFLKGEGHKVIDVGTHAQESTHYPIYAKEVVRAIRSGKAERGILICGTGIGMSITANKFRG
IRAALCTNEYMARMSRLHNDANVLCLGERVLGVELALSIVKVWLETPFEGGRHLKRLEIISEIEDEICGENIPR

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=144, Percent_Identity=54.1666666666667, Blast_Score=156, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 17053; Mature: 17053

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIGSDHAGFPLKEKIKEFLKGEGHKVIDVGTHAQESTHYPIYAKEVVRAIRSGKAER
CEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
GILICGTGIGMSITANKFRGIRAALCTNEYMARMSRLHNDANVLCLGERVLGVELALSIV
CEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH
KVWLETPFEGGRHLKRLEIISEIEDEICGENIPR
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIAIGSDHAGFPLKEKIKEFLKGEGHKVIDVGTHAQESTHYPIYAKEVVRAIRSGKAER
CEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
GILICGTGIGMSITANKFRGIRAALCTNEYMARMSRLHNDANVLCLGERVLGVELALSIV
CEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH
KVWLETPFEGGRHLKRLEIISEIEDEICGENIPR
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]