Click here to switch to the map view.

The map label for this gene is 15606223

Identifier: 15606223

GI number: 15606223

Start: 614467

End: 615270

Strand: Direct

Name: 15606223

Synonym: aq_890

Alternate gene names: NA

Gene position: 614467-615270 (Clockwise)

Preceding gene: 15606222

Following gene: 15606225

Centisome position: 39.61

GC content: 46.77

Gene sequence:

>804_bases
ATGAGGGTAAGAGAGCCGGCAGTTGCAGGAACTTTTTACCCGAAGGATAAGGAAGAGCTAAATAAGTTAATGGATTTACT
CTGCGGTTTCGAGCCAAAGGAAAAGATAAAACCCAAAGCCATTTTAGTTCCCCACGCGGGCTACATATACAGCGGAAAAA
CCGCCTGTGAAGTTTACAAGAGGATTGAGATTCCCGAAAAGGTTGTGCTTCTTGGACCCAACCACACGGGACTTGGAAAA
CCGATATCCGTGTACAGCGGAGATGCATGGGAAACCCCTTACGGAGTTGTTGAGATTGACGGAGAACTGAGGGAGAAAAT
CTTAAAATACCCCTACGCAAACCCTGACGAATACGCACATTTGTACGAGCACTCTCTGGAAGTCCAGCTTCCCTTCCTCC
AGAGGTACGCAAGAAGGGAGTTTAAGATACTCCCCATAGTTGTAACCTTTGTGGAGTATGAAGTTGCAAAAGATTTCGGA
AGGTTCTTGGGAGAAGTTCTGAAGGAAGAAGACGCCCTCATAGTTATAAGCTCGGACATGAGCCACTACGTTCCCGCCGA
GGAAGCGAGAAAGAAGGACGAGATACTCATATCCGCCATGGAAAGACTAAACACCGAGGAGCTCTACTTTAAGGCTGTTC
AATACAACATAACAATGTGCGGAGTTGTGCCTGCGGTTGTAGGAATAGAGTCGGCAAAAGTGCTCGGAGCAACGAAGGGA
ATAGTGGTTGATTACTCAAACTCCGGAGACACGACGGGAGACTACTCTCAGGTGGTAGCTTACTTAGGAATGATTTTCCT
TTAA

Upstream 100 bases:

>100_bases
AAGGACGTCCTGAGCGAACTCCCCGAAGACATAAGAGAAATGTTAGAAAACGCTTAATTTTTCCTTTCCCCTTTCTAAAT
TTTTTTATTGGAGTTGGAAT

Downstream 100 bases:

>100_bases
TACTTCACTCACGAGAACGCCTTCTCTGAGTCCCCAGTCGCTCACGATTAAACAATCCTTTTCAAAAATTTCTAAGGTTT
TTAAGAATATGCCTATTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRVREPAVAGTFYPKDKEELNKLMDLLCGFEPKEKIKPKAILVPHAGYIYSGKTACEVYKRIEIPEKVVLLGPNHTGLGK
PISVYSGDAWETPYGVVEIDGELREKILKYPYANPDEYAHLYEHSLEVQLPFLQRYARREFKILPIVVTFVEYEVAKDFG
RFLGEVLKEEDALIVISSDMSHYVPAEEARKKDEILISAMERLNTEELYFKAVQYNITMCGVVPAVVGIESAKVLGATKG
IVVDYSNSGDTTGDYSQVVAYLGMIFL

Sequences:

>Translated_267_residues
MRVREPAVAGTFYPKDKEELNKLMDLLCGFEPKEKIKPKAILVPHAGYIYSGKTACEVYKRIEIPEKVVLLGPNHTGLGK
PISVYSGDAWETPYGVVEIDGELREKILKYPYANPDEYAHLYEHSLEVQLPFLQRYARREFKILPIVVTFVEYEVAKDFG
RFLGEVLKEEDALIVISSDMSHYVPAEEARKKDEILISAMERLNTEELYFKAVQYNITMCGVVPAVVGIESAKVLGATKG
IVVDYSNSGDTTGDYSQVVAYLGMIFL
>Mature_267_residues
MRVREPAVAGTFYPKDKEELNKLMDLLCGFEPKEKIKPKAILVPHAGYIYSGKTACEVYKRIEIPEKVVLLGPNHTGLGK
PISVYSGDAWETPYGVVEIDGELREKILKYPYANPDEYAHLYEHSLEVQLPFLQRYARREFKILPIVVTFVEYEVAKDFG
RFLGEVLKEEDALIVISSDMSHYVPAEEARKKDEILISAMERLNTEELYFKAVQYNITMCGVVPAVVGIESAKVLGATKG
IVVDYSNSGDTTGDYSQVVAYLGMIFL

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family

Homologues:

Organism=Homo sapiens, GI7705720, Length=246, Percent_Identity=27.2357723577236, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25146594, Length=253, Percent_Identity=26.0869565217391, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32566861, Length=253, Percent_Identity=26.0869565217391, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322467, Length=203, Percent_Identity=29.5566502463054, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21357419, Length=265, Percent_Identity=26.7924528301887, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y890_AQUAE (O67039)

Other databases:

- EMBL:   AE000657
- PIR:   D70376
- RefSeq:   NP_213601.1
- ProteinModelPortal:   O67039
- SMR:   O67039
- GeneID:   1193581
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_890
- NMPDR:   fig|224324.1.peg.616
- HOGENOM:   HBG575564
- OMA:   GPNHTGY
- PhylomeDB:   O67039
- ProtClustDB:   CLSK2299533
- BioCyc:   AAEO224324:AQ_890-MONOMER
- HAMAP:   MF_00055
- InterPro:   IPR020619
- InterPro:   IPR002737
- PANTHER:   PTHR11060

Pfam domain/function: PF01875 Memo

EC number: NA

Molecular weight: Translated: 30072; Mature: 30072

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVREPAVAGTFYPKDKEELNKLMDLLCGFEPKEKIKPKAILVPHAGYIYSGKTACEVYK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCEEEECCCCEEECCCHHHHHHH
RIEIPEKVVLLGPNHTGLGKPISVYSGDAWETPYGVVEIDGELREKILKYPYANPDEYAH
HCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCCHHHHHH
LYEHSLEVQLPFLQRYARREFKILPIVVTFVEYEVAKDFGRFLGEVLKEEDALIVISSDM
HHHHCCEEEEHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SHYVPAEEARKKDEILISAMERLNTEELYFKAVQYNITMCGVVPAVVGIESAKVLGATKG
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEHHHHCEEHHHHHHHHHCCCCHHHEECCCC
IVVDYSNSGDTTGDYSQVVAYLGMIFL
EEEEECCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRVREPAVAGTFYPKDKEELNKLMDLLCGFEPKEKIKPKAILVPHAGYIYSGKTACEVYK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCEEEECCCCEEECCCHHHHHHH
RIEIPEKVVLLGPNHTGLGKPISVYSGDAWETPYGVVEIDGELREKILKYPYANPDEYAH
HCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCCHHHHHH
LYEHSLEVQLPFLQRYARREFKILPIVVTFVEYEVAKDFGRFLGEVLKEEDALIVISSDM
HHHHCCEEEEHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SHYVPAEEARKKDEILISAMERLNTEELYFKAVQYNITMCGVVPAVVGIESAKVLGATKG
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEHHHHCEEHHHHHHHHHCCCCHHHEECCCC
IVVDYSNSGDTTGDYSQVVAYLGMIFL
EEEEECCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320