Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is yfeA [H]

Identifier: 15606053

GI number: 15606053

Start: 420088

End: 420924

Strand: Direct

Name: yfeA [H]

Synonym: aq_619

Alternate gene names: 15606053

Gene position: 420088-420924 (Clockwise)

Preceding gene: 15606052

Following gene: 15606054

Centisome position: 27.08

GC content: 39.67

Gene sequence:

>837_bases
ATGAAGAAATTTTTAATAATCCTCTTATCCTTCGTTCTTTTCGTATTCCCTGAGGATCTTATTCTCGTGAGCATTTATCC
CTTTTACGACGTTGTAAAAGACATAAGCGGGAAGTATTACAGAGTTGAGAGTTTAGTTCCTCCGAAAGCGGATTACCACG
TTTACGAATTGACACCAAGAGAACTCATAAAACTCTACAGGGCAAAAGTCGTTTTCGTTAGCGGTGTTCCCTTAGGAGAG
TGGGAAGAGAAGGTGGAGAAAATAGCCAAGGGCAAAGTTTACTCCCTGTCAAAAGGCATAGAGCTAATCACCTACGGACA
CGAAGAATTAGGGAAGGATCCTCATTTCTGGGTATCTCCAAAAAGAATGCTAAAAGTGGCTAAAAACGTAGAAGAAGCCC
TCACGGAAACCTTTAAAAAGAACTTTTCTGAAAATTACAAAAACGTTGAGCAAGAGCTGAAAAAACTGGATGAAGCTTAC
ACGAAAACGCTTTCCAAGTGCGAGTATAAAAAGTTCGGAGCAGTTCACGGAGCCTTCGGATACCTTGCGAAAGACTACGG
ACTTGAACAGGTACTCCTCAGGGAGGAGCACGGACACGGTGATATATCTCCATCTGAACTGAAAAAACTTGTAAAACTCA
TAAAGAAAAAGGAAATAAAGGTAGTTTTAATTCCTAAAGGTGTGCACTCAAAGTTTGCAGAAATATTGAAGGAAACGTAC
AACATCACCGTTTACGAGGTAAACGTTAAGATAATCCCGGAAGAGGAGGGAGATAATTATTACAAAATTATGGAAAGGAA
CTTAAAAGTTTTAAAAGAAGCTCTCAAATGCGGGTAA

Upstream 100 bases:

>100_bases
ACACGGGGAAACCCGTGGAAGTTGACGGCAACCTTATTACCGCAACCGATCCCAAGTCCATGCTTGAGATGATGAAGGTG
ATTATATCGAGGCTAAAGTA

Downstream 100 bases:

>100_bases
TAGAAGTAAAAAATCTTACCTTTTCATACGACGGTAAACACAACGTCCTTGAAGACGTTTCTTTTTACGTAGAAAAGGGA
GACTTTTTGGGGATAGTTGG

Product: adhesion B precursor

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPRELIKLYRAKVVFVSGVPLGE
WEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSPKRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAY
TKTLSKCEYKKFGAVHGAFGYLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY
NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG

Sequences:

>Translated_278_residues
MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPRELIKLYRAKVVFVSGVPLGE
WEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSPKRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAY
TKTLSKCEYKKFGAVHGAFGYLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY
NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG
>Mature_278_residues
MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPRELIKLYRAKVVFVSGVPLGE
WEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSPKRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAY
TKTLSKCEYKKFGAVHGAFGYLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY
NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG

Specific function: Part of the ATP-driven transport system AdcABC for zinc. Required for transformability [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR006128
- InterPro:   IPR015304 [H]

Pfam domain/function: PF01297 SBP_bac_9; PF09223 YodA [H]

EC number: NA

Molecular weight: Translated: 32207; Mature: 32207

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPR
CHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCHH
ELIKLYRAKVVFVSGVPLGEWEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSP
HHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEHHCCCEEEEECHHHHCCCCCEEECH
KRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAYTKTLSKCEYKKFGAVHGAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY
HHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG
CEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFLIILLSFVLFVFPEDLILVSIYPFYDVVKDISGKYYRVESLVPPKADYHVYELTPR
CHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCHH
ELIKLYRAKVVFVSGVPLGEWEEKVEKIAKGKVYSLSKGIELITYGHEELGKDPHFWVSP
HHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEHHCCCEEEEECHHHHCCCCCEEECH
KRMLKVAKNVEEALTETFKKNFSENYKNVEQELKKLDEAYTKTLSKCEYKKFGAVHGAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YLAKDYGLEQVLLREEHGHGDISPSELKKLVKLIKKKEIKVVLIPKGVHSKFAEILKETY
HHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
NITVYEVNVKIIPEEEGDNYYKIMERNLKVLKEALKCG
CEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]