Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is 15605948

Identifier: 15605948

GI number: 15605948

Start: 311779

End: 312390

Strand: Direct

Name: 15605948

Synonym: aq_460

Alternate gene names: NA

Gene position: 311779-312390 (Clockwise)

Preceding gene: 15605947

Following gene: 15605949

Centisome position: 20.1

GC content: 42.32

Gene sequence:

>612_bases
ATGATAGGAAGAGTTTTCAGGATTTTCAGAGAAAAGGGAGGAATTTTAAAGGCTCTCGGCCTTTGGGAGTGGTACGAAAA
CCTGCCGCACAAGTACCAAAAAAAGGTAAAACATTACTACTCTTTAAAAACTATAAAGAGTATAAACTTCCCTTACAAAG
CCAAGCACTTTGATACGGGAGAAGTCGAAAACGTCCTCTACACAAAGAGAACCTTTTTAGGCACGATAGCCCAGACTGCA
CTCCTTGAAGGTGACCTCGAATTTGCGGAATGGCTCTACAACGAAGCTCTGAAAATGGAAGGCAGTCCTTATGAGGCTCA
TCTCATTTTAAACGACCTCGTTTTGCTTGCCCAAAAACAAAGAGATTTGGAAAAGGTTAAAAAGTACGTCCTTCAGGACG
TGGAACTTTACCCTGAGTACAAGGAAGAGTTAAAGAGCAGGTGGGGGGGAACCCTTCCCCAGATAATGGCTTTTGAGATT
TACGTTTACCTTTTGGAGAGAGAAGGAAAGATAAAGGAAGCCCTTGAACTCGTGGAGTGGATAAAAAAAGAGGGGATAAC
CTACCCCTATTACGACCAAGTAAAGGAGAGACTACTTCAAAAACTCAAGTAG

Upstream 100 bases:

>100_bases
TTATGAGTTTTTCCAATTCAATAGATGAGGTTGACAGGAAATCACGTGATTTTTGTCCTAACTGCAGGAGAAAACTGGAC
TACGTTTTATCCTATTACCG

Downstream 100 bases:

>100_bases
AATTTATTCTTATGAACGAAAAGTACGAGGCTGTAATCGGTCTTGAAATACACGTGCAGATGGACACAAAGACTAAGATG
TTCTGTGGTTGTAAAGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MIGRVFRIFREKGGILKALGLWEWYENLPHKYQKKVKHYYSLKTIKSINFPYKAKHFDTGEVENVLYTKRTFLGTIAQTA
LLEGDLEFAEWLYNEALKMEGSPYEAHLILNDLVLLAQKQRDLEKVKKYVLQDVELYPEYKEELKSRWGGTLPQIMAFEI
YVYLLEREGKIKEALELVEWIKKEGITYPYYDQVKERLLQKLK

Sequences:

>Translated_203_residues
MIGRVFRIFREKGGILKALGLWEWYENLPHKYQKKVKHYYSLKTIKSINFPYKAKHFDTGEVENVLYTKRTFLGTIAQTA
LLEGDLEFAEWLYNEALKMEGSPYEAHLILNDLVLLAQKQRDLEKVKKYVLQDVELYPEYKEELKSRWGGTLPQIMAFEI
YVYLLEREGKIKEALELVEWIKKEGITYPYYDQVKERLLQKLK
>Mature_203_residues
MIGRVFRIFREKGGILKALGLWEWYENLPHKYQKKVKHYYSLKTIKSINFPYKAKHFDTGEVENVLYTKRTFLGTIAQTA
LLEGDLEFAEWLYNEALKMEGSPYEAHLILNDLVLLAQKQRDLEKVKKYVLQDVELYPEYKEELKSRWGGTLPQIMAFEI
YVYLLEREGKIKEALELVEWIKKEGITYPYYDQVKERLLQKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y460_AQUAE (O66765)

Other databases:

- EMBL:   AE000657
- PIR:   A70342
- RefSeq:   NP_213325.1
- GeneID:   1193091
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_460
- NMPDR:   fig|224324.1.peg.340
- ProtClustDB:   CLSK2748315
- BioCyc:   AAEO224324:AQ_460-MONOMER
- GO:   GO:0005488
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24237; Mature: 24237

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRVFRIFREKGGILKALGLWEWYENLPHKYQKKVKHYYSLKTIKSINFPYKAKHFDTG
CHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EVENVLYTKRTFLGTIAQTALLEGDLEFAEWLYNEALKMEGSPYEAHLILNDLVLLAQKQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RDLEKVKKYVLQDVELYPEYKEELKSRWGGTLPQIMAFEIYVYLLEREGKIKEALELVEW
HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IKKEGITYPYYDQVKERLLQKLK
HHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIGRVFRIFREKGGILKALGLWEWYENLPHKYQKKVKHYYSLKTIKSINFPYKAKHFDTG
CHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EVENVLYTKRTFLGTIAQTALLEGDLEFAEWLYNEALKMEGSPYEAHLILNDLVLLAQKQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RDLEKVKKYVLQDVELYPEYKEELKSRWGGTLPQIMAFEIYVYLLEREGKIKEALELVEW
HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IKKEGITYPYYDQVKERLLQKLK
HHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320