Click here to switch to the map view.

The map label for this gene is amzA [H]

Identifier: 15605947

GI number: 15605947

Start: 311258

End: 311782

Strand: Direct

Name: amzA [H]

Synonym: aq_459

Alternate gene names: 15605947

Gene position: 311258-311782 (Clockwise)

Preceding gene: 15605946

Following gene: 15605948

Centisome position: 20.06

GC content: 46.48

Gene sequence:

>525_bases
GTGGGCTATATTTACATCGTTTCTTTCGGAGACGTTGAAGACAGACTTTTGCTTGCGGATGCCTCCAATGTAAAGGAGAT
ATTTGATCTGGAAGTAAGGGTTTCCACTGTAAAAGCGGACATTGAAGAAGCCTACAACCCCCAGAGAAACCAGTACCATG
CAGGAACGATTCTGAGCTACCTCTCAAGGGTAGTTTACCCGGATATGGTGAGGCTCGTAGCTCTGGTAAGTTTCGACCTC
TACGAGGAGGGACTTAACTTCGTCTTTGGAGAAGCCCAGTACGGGGGAAAGTACGCAGTTGTGAGCACTTACAGGCTTTA
TCATCCCGACGAGAGGGTATTCTTCGAAAGGGTTTTTAAAGAGACGAACCACGAACTCGGGCACACTTTCGGACTCAAAC
ACTGCCCCGACCCCTACTGCGTTATGAGTTTTTCCAATTCAATAGATGAGGTTGACAGGAAATCACGTGATTTTTGTCCT
AACTGCAGGAGAAAACTGGACTACGTTTTATCCTATTACCGATGA

Upstream 100 bases:

>100_bases
GAAAAGATCTACAGAGGAGTAAGTCCTTCTGCGGATCCCCATAAGGTTCTTGAGTACATAAAACAAAGAGCTTCATGAGT
TTTATAAAATAAACTCCATC

Downstream 100 bases:

>100_bases
TAGGAAGAGTTTTCAGGATTTTCAGAGAAAAGGGAGGAATTTTAAAGGCTCTCGGCCTTTGGGAGTGGTACGAAAACCTG
CCGCACAAGTACCAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MGYIYIVSFGDVEDRLLLADASNVKEIFDLEVRVSTVKADIEEAYNPQRNQYHAGTILSYLSRVVYPDMVRLVALVSFDL
YEEGLNFVFGEAQYGGKYAVVSTYRLYHPDERVFFERVFKETNHELGHTFGLKHCPDPYCVMSFSNSIDEVDRKSRDFCP
NCRRKLDYVLSYYR

Sequences:

>Translated_174_residues
MGYIYIVSFGDVEDRLLLADASNVKEIFDLEVRVSTVKADIEEAYNPQRNQYHAGTILSYLSRVVYPDMVRLVALVSFDL
YEEGLNFVFGEAQYGGKYAVVSTYRLYHPDERVFFERVFKETNHELGHTFGLKHCPDPYCVMSFSNSIDEVDRKSRDFCP
NCRRKLDYVLSYYR
>Mature_173_residues
GYIYIVSFGDVEDRLLLADASNVKEIFDLEVRVSTVKADIEEAYNPQRNQYHAGTILSYLSRVVYPDMVRLVALVSFDLY
EEGLNFVFGEAQYGGKYAVVSTYRLYHPDERVFFERVFKETNHELGHTFGLKHCPDPYCVMSFSNSIDEVDRKSRDFCPN
CRRKLDYVLSYYR

Specific function: Probable zinc metalloprotease [H]

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M54 family [H]

Homologues:

Organism=Homo sapiens, GI75812974, Length=175, Percent_Identity=29.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812972, Length=175, Percent_Identity=29.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812970, Length=175, Percent_Identity=29.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812968, Length=175, Percent_Identity=29.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812966, Length=175, Percent_Identity=29.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812976, Length=152, Percent_Identity=29.6052631578947, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012962
- InterPro:   IPR012091 [H]

Pfam domain/function: PF07998 Peptidase_M54 [H]

EC number: NA

Molecular weight: Translated: 20337; Mature: 20206

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYIYIVSFGDVEDRLLLADASNVKEIFDLEVRVSTVKADIEEAYNPQRNQYHAGTILSY
CCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LSRVVYPDMVRLVALVSFDLYEEGLNFVFGEAQYGGKYAVVSTYRLYHPDERVFFERVFK
HHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHH
ETNHELGHTFGLKHCPDPYCVMSFSNSIDEVDRKSRDFCPNCRRKLDYVLSYYR
HHCHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GYIYIVSFGDVEDRLLLADASNVKEIFDLEVRVSTVKADIEEAYNPQRNQYHAGTILSY
CEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LSRVVYPDMVRLVALVSFDLYEEGLNFVFGEAQYGGKYAVVSTYRLYHPDERVFFERVFK
HHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHH
ETNHELGHTFGLKHCPDPYCVMSFSNSIDEVDRKSRDFCPNCRRKLDYVLSYYR
HHCHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]