Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is 15605913

Identifier: 15605913

GI number: 15605913

Start: 283036

End: 284355

Strand: Direct

Name: 15605913

Synonym: aq_414

Alternate gene names: NA

Gene position: 283036-284355 (Clockwise)

Preceding gene: 15605912

Following gene: 15605914

Centisome position: 18.24

GC content: 44.02

Gene sequence:

>1320_bases
ATGAGCGTGGTGATAATAGGTGTCGGGCGTTACGCAAGGGAAGTTCTGGAGATAGTAACCGCTATAACAGAAGTCTACGT
TATAGAAAAGCCCGGAGAACACATACAGAAGTTTGTGGAAGAAGCTAAAGGGCTGGAGAAAGTGAAGTTCGTTTTTGAAA
GTGCCACGGACGTGGAAACTTGGAGGGAGAAGGTAAACCTCTCCGAGGTAGAAGCGGTAATATCCTTCCTTAAGTTAGAA
AGCACGCTGGAGGTGGCAAAGCTCCTTAGGGAATTTTTCAATTACGAGGGAGAGATAATTTACGTTGCGAACGAAAGACC
AGAAAACGAAGAACTCCAGAAGCTCAAAGTGGACACGGTTTCCATTCCAAACGTACTCAGGGTAATCTTCAAAAACCTCC
TGATCGGCAAAGGAATAATAAGGTATCCCGTGGGTATAGGTCTAGAAAAGGGTGAGATAGTGGAAATTACACTTACGGAG
TACTCACCTCTCGTTTACAAAAGACTCAGGGATATTAAGATAAGGAAGGCAAGGGTAGCCCTCGTGTATAGGAACGGAAA
GCTTTTACTTCCAAGGAGTAACTTAAGGCTCCAGAGCGGAGACAGGCTTCTGGTAGTCGGAGAACCTTCCTCTGTAAACG
TATTTATACACACTGCAACGGAAGGAATTTCGGACTTTCCCCTGAACTGGGGAAGTGCAGGCGTTTACTGTTCGGGAAAC
GAGAAAGAATTCAATTACCTGAAAGAGAAAGTTAAAGTAAGGGAATGGTTAGAGGATTGTGAAAAAATACAGGAGATTGA
GAACTTGGGGCTTATAGTTCTTGAAAAGAAGGAAAGCGGTTTTCTTAAAAAGGGAAGCGTTGACAGGGCTTTTGAAGAGT
TTTCTGTTCCTTCCTTTCACCTGAAGGGTACTTACCCTTACGAGAAGGTTCTCGCTTCCGCGAACACAGATGCGAGGGAA
GTCTTGCTCTCCACTGCGGTTGATATAGCTGTTCAGTTCGGTTCAAAGCTGTTCATACTCTACGTAAAGCCCTTTGAAAA
GATGATTTCCGAAAAGGAAAAGGAGGTAATAGAAGGGCTAAAGAGCTTCGCAGAAAGGGTTAGAAAGATAACGAAGATAA
ACCTGGAACTCGTGATAAGGGAAGGAAATCCCGTAAGGGAAACCTTAAAGTTCATGGATGAAGAAAGCTTTAATCTCCTC
CTAATAGGATACAAGGTGGGAAGAACTACGAAATTATTCTCACCTTACTCACCTCACCTCATAGCGAGAAAGAGTAAACT
CAGTACTCTCCTTGTGCCGGAGGTTGTCCTTGAGCAGTGA

Upstream 100 bases:

>100_bases
ATATAATTTCTGAAGGGAAGGTTCTGGCTCACGGGAAACCCGAAGAGGTTGTGAACAACGAAGCTGTAAGGAAGACATAC
CTGGGGGTGGATTTCAAATT

Downstream 100 bases:

>100_bases
ACTCTTCCTCATAATCGTATTCCTTTCCGCCTTCCTTGCACCACTTTTTTCAAGAATCCTTAGAATGCCCGTACCCGTAG
GTGAACTCATTTTCGGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: TrkA-C Domain Protein; Potassium Uptake Protein TrkA; TrkA-N Domain Family Protein

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MSVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVETWREKVNLSEVEAVISFLKLE
STLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTVSIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTE
YSPLVYKRLRDIKIRKARVALVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGN
EKEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFHLKGTYPYEKVLASANTDARE
VLLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGLKSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLL
LIGYKVGRTTKLFSPYSPHLIARKSKLSTLLVPEVVLEQ

Sequences:

>Translated_439_residues
MSVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVETWREKVNLSEVEAVISFLKLE
STLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTVSIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTE
YSPLVYKRLRDIKIRKARVALVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGN
EKEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFHLKGTYPYEKVLASANTDARE
VLLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGLKSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLL
LIGYKVGRTTKLFSPYSPHLIARKSKLSTLLVPEVVLEQ
>Mature_438_residues
SVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVETWREKVNLSEVEAVISFLKLES
TLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTVSIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTEY
SPLVYKRLRDIKIRKARVALVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGNE
KEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFHLKGTYPYEKVLASANTDAREV
LLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGLKSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLLL
IGYKVGRTTKLFSPYSPHLIARKSKLSTLLVPEVVLEQ

Specific function: Unknown

COG id: COG3400

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50041; Mature: 49910

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVET
CEEEEEECCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCHHH
WREKVNLSEVEAVISFLKLESTLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHEECCCC
SIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTEYSPLVYKRLRDIKIRKARVA
CCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCEEEEEEEE
LVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGN
EEEECCEEEEECCCCEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEECCC
EKEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFH
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEE
LKGTYPYEKVLASANTDAREVLLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGL
ECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHH
KSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLLLIGYKVGRTTKLFSPYSPHL
HHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCCC
IARKSKLSTLLVPEVVLEQ
EEEHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
SVVIIGVGRYAREVLEIVTAITEVYVIEKPGEHIQKFVEEAKGLEKVKFVFESATDVET
EEEEEECCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCHHH
WREKVNLSEVEAVISFLKLESTLEVAKLLREFFNYEGEIIYVANERPENEELQKLKVDTV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHEECCCC
SIPNVLRVIFKNLLIGKGIIRYPVGIGLEKGEIVEITLTEYSPLVYKRLRDIKIRKARVA
CCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCEEEEEEEE
LVYRNGKLLLPRSNLRLQSGDRLLVVGEPSSVNVFIHTATEGISDFPLNWGSAGVYCSGN
EEEECCEEEEECCCCEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEECCC
EKEFNYLKEKVKVREWLEDCEKIQEIENLGLIVLEKKESGFLKKGSVDRAFEEFSVPSFH
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEE
LKGTYPYEKVLASANTDAREVLLSTAVDIAVQFGSKLFILYVKPFEKMISEKEKEVIEGL
ECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHH
KSFAERVRKITKINLELVIREGNPVRETLKFMDEESFNLLLIGYKVGRTTKLFSPYSPHL
HHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCCC
IARKSKLSTLLVPEVVLEQ
EEEHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA