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The map label for this gene is oppB [H]

Identifier: 15603774

GI number: 15603774

Start: 2148421

End: 2149341

Strand: Reverse

Name: oppB [H]

Synonym: PM1909

Alternate gene names: 15603774

Gene position: 2149341-2148421 (Counterclockwise)

Preceding gene: 15603775

Following gene: 15603773

Centisome position: 95.21

GC content: 42.13

Gene sequence:

>921_bases
ATGTTTAAATTAATTCTTCGCCGTCTTTTACAGGCAATTCCAACGCTTTTTATTTTAATTACGATTTCATTTTTCATGAT
GCGCTTAGCGCCAGGTAGCCCCTTTACCAGTGAAAAAAATTACCCAGCGGAAGTGATCGCCAATATTGAAGCCAAATATC
ATTTAAATGAGCCACTTTATAAACAATACCTGATCTATTTAAAAGATCTTGCGCATGGTGATTTTGGTCCTTCTTTTAAA
TACAAAGACTATACCGTCAATCAGCTCGTGTCAGCCGCCTTTCCTGTGTCATTCAAACTCGGCATTTCCGCGTTCTTTGT
CGCACTTATCCTTGGCGTCAGCGCAGGTACTATTGCCGCACTGAAACAGAATAAATGGCTTGATTATGTGATCATGACCT
TTGCTATGACTGGGGTGGTCATCCCTAGCTTTGTTGTTGCCCCACTGTTAGTTTTAATTTTCTCTATTTCATTAAAATGG
TTACCGTCTGGCGGTTGGGAAGGTGGTGCATTTAAATTCATGCTGATGCCCATGATTGCTCTGTGCCTTTCTTATATTGC
AAGTATTGCACGTATTACCCGTGGTTCCATGATTGAAGTCCTACATTCCAACTTCATTCGTACAGCTAAAGCAAAAGGCT
TACCGATGCGTCGTATTCTACTCAAACACGCTTTACGTCCGGCTATGCTGCCCGTCATTTCTTATATGGGACCCGCTTTC
GTGGGGATTATTACTGGCTCCATGGTGATCGAAAGTATTTTTGGTATTCCCGGGATTGGTCAACTGTTTGTGAATGGCGC
ACTGAATCGTGATTACTCACTGGTCCTAAGCCTCACCATTTTAGTCGGCGCCTTAACTATCGCATTCAATGCGATCGTCG
ATATTCTTTATGCGGTGATTGATCCCAAAATCCGTTATTAA

Upstream 100 bases:

>100_bases
TAATCATTTTGATATATTTTAGTGCGGTCACGACTTGGGTCACACCGACCGCACTTTTTTAGTTTTCGCACCTTGCGATC
TATGGATTGGATTATCTTGT

Downstream 100 bases:

>100_bases
TTGGCAATTGTTGTAGGAAGTCAACTCATGTTAAACAATCAAAAAGATACTGAATTGCTAGAAGCGGTGACAGAAAAATT
AGACACGCTTGAAGGTCGTA

Product: oligopeptide transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MFKLILRRLLQAIPTLFILITISFFMMRLAPGSPFTSEKNYPAEVIANIEAKYHLNEPLYKQYLIYLKDLAHGDFGPSFK
YKDYTVNQLVSAAFPVSFKLGISAFFVALILGVSAGTIAALKQNKWLDYVIMTFAMTGVVIPSFVVAPLLVLIFSISLKW
LPSGGWEGGAFKFMLMPMIALCLSYIASIARITRGSMIEVLHSNFIRTAKAKGLPMRRILLKHALRPAMLPVISYMGPAF
VGIITGSMVIESIFGIPGIGQLFVNGALNRDYSLVLSLTILVGALTIAFNAIVDILYAVIDPKIRY

Sequences:

>Translated_306_residues
MFKLILRRLLQAIPTLFILITISFFMMRLAPGSPFTSEKNYPAEVIANIEAKYHLNEPLYKQYLIYLKDLAHGDFGPSFK
YKDYTVNQLVSAAFPVSFKLGISAFFVALILGVSAGTIAALKQNKWLDYVIMTFAMTGVVIPSFVVAPLLVLIFSISLKW
LPSGGWEGGAFKFMLMPMIALCLSYIASIARITRGSMIEVLHSNFIRTAKAKGLPMRRILLKHALRPAMLPVISYMGPAF
VGIITGSMVIESIFGIPGIGQLFVNGALNRDYSLVLSLTILVGALTIAFNAIVDILYAVIDPKIRY
>Mature_306_residues
MFKLILRRLLQAIPTLFILITISFFMMRLAPGSPFTSEKNYPAEVIANIEAKYHLNEPLYKQYLIYLKDLAHGDFGPSFK
YKDYTVNQLVSAAFPVSFKLGISAFFVALILGVSAGTIAALKQNKWLDYVIMTFAMTGVVIPSFVVAPLLVLIFSISLKW
LPSGGWEGGAFKFMLMPMIALCLSYIASIARITRGSMIEVLHSNFIRTAKAKGLPMRRILLKHALRPAMLPVISYMGPAF
VGIITGSMVIESIFGIPGIGQLFVNGALNRDYSLVLSLTILVGALTIAFNAIVDILYAVIDPKIRY

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=306, Percent_Identity=81.0457516339869, Blast_Score=509, Evalue=1e-146,
Organism=Escherichia coli, GI1787053, Length=308, Percent_Identity=36.3636363636364, Blast_Score=211, Evalue=5e-56,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=32.5443786982249, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1789888, Length=310, Percent_Identity=32.9032258064516, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=31.8681318681319, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=26.7955801104972, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787761, Length=312, Percent_Identity=30.1282051282051, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33813; Mature: 33813

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLILRRLLQAIPTLFILITISFFMMRLAPGSPFTSEKNYPAEVIANIEAKYHLNEPLY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHCCCCCHHH
KQYLIYLKDLAHGDFGPSFKYKDYTVNQLVSAAFPVSFKLGISAFFVALILGVSAGTIAA
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
LKQNKWLDYVIMTFAMTGVVIPSFVVAPLLVLIFSISLKWLPSGGWEGGAFKFMLMPMIA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LCLSYIASIARITRGSMIEVLHSNFIRTAKAKGLPMRRILLKHALRPAMLPVISYMGPAF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGIITGSMVIESIFGIPGIGQLFVNGALNRDYSLVLSLTILVGALTIAFNAIVDILYAVI
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPKIRY
CCCCCC
>Mature Secondary Structure
MFKLILRRLLQAIPTLFILITISFFMMRLAPGSPFTSEKNYPAEVIANIEAKYHLNEPLY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHCCCCCHHH
KQYLIYLKDLAHGDFGPSFKYKDYTVNQLVSAAFPVSFKLGISAFFVALILGVSAGTIAA
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
LKQNKWLDYVIMTFAMTGVVIPSFVVAPLLVLIFSISLKWLPSGGWEGGAFKFMLMPMIA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LCLSYIASIARITRGSMIEVLHSNFIRTAKAKGLPMRRILLKHALRPAMLPVISYMGPAF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGIITGSMVIESIFGIPGIGQLFVNGALNRDYSLVLSLTILVGALTIAFNAIVDILYAVI
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPKIRY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]