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The map label for this gene is oppC [H]

Identifier: 15603773

GI number: 15603773

Start: 2147482

End: 2148393

Strand: Reverse

Name: oppC [H]

Synonym: PM1908

Alternate gene names: 15603773

Gene position: 2148393-2147482 (Counterclockwise)

Preceding gene: 15603774

Following gene: 15603772

Centisome position: 95.17

GC content: 42.11

Gene sequence:

>912_bases
ATGTTAAACAATCAAAAAGATACTGAATTGCTAGAAGCGGTGACAGAAAAATTAGACACGCTTGAAGGTCGTAGCTTATG
GCAAGATGCACGTCGTCGTTTTTTTCATAATAAAGCCGCATTAACCAGCTTATTTGTGTTATTTTGCATTAGCTTGTTCG
TCATTTTTGCGCCAATGCTCATGCCTTACCCTTATGACGAACTTGATTTTGGTGCAATTTCGATTCCACCTGAGTGGGAA
ACTATGCACTATTTTGGTACAGATGCCTCGGGGCGTGATTTATTAGTACGTGTGGCAATCGGAGGACGTATTTCTCTGTT
AGTCGGCATTGCTGGTGCCTTAATTGCAGTCTTAGTCGGAACCTTATATGGTGCTACATCTGGCTATATTGGTGGCAAAG
TCGATACCTTTATGATGCGCTTTTTGGAAATTCTTAACTCCTTTCCTTTCATGTTCTTTGTTATCCTTTTAGTCACTTTC
TTTGGACGGAACATTTTCTTAATCTTCGTCGCAATTGGCATGGTGTCTTGGCTCGATATGGCAAGGATTGTACGTGGACA
AACCTTGAGTTTGAAACAAAAAGAATTTATTGAAGCTGCGATTGTGTGCGGTGTATCTTCACGCCAAATTGTTTGGCGTC
ATATTGTGCCAAACGTACTTGGTGTCGTAGTCGTTTATGCCTCTTTACTTGTACCAGGCATGATCTTATTTGAATCCTTT
TTAAGTTTCTTAGGTCTCGGCACACAGGAGCCTTTAAGTAGCTGGGGCGGTCTTCTCAATGACGGTGCAAAATCCATGGA
AGCCGCGCCTTGGCTCTTAATCTTCCCCGCACTCTTTTTAGTCATTACCCTATTTTGTTTTAACTTTATCGGTGACGGGT
TACGTGATGCGCTTGACCCGAAAGACCGTTAA

Upstream 100 bases:

>100_bases
CGCCTTAACTATCGCATTCAATGCGATCGTCGATATTCTTTATGCGGTGATTGATCCCAAAATCCGTTATTAATTGGCAA
TTGTTGTAGGAAGTCAACTC

Downstream 100 bases:

>100_bases
TACCCGCGCTTGGAGAGAAAAATGACAACTCACAATTTATTACTCGATGTACAAGATTTGCGCGTAACCTTTAAGACCCC
AGATGGCGATGTTACTGCCG

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLNNQKDTELLEAVTEKLDTLEGRSLWQDARRRFFHNKAALTSLFVLFCISLFVIFAPMLMPYPYDELDFGAISIPPEWE
TMHYFGTDASGRDLLVRVAIGGRISLLVGIAGALIAVLVGTLYGATSGYIGGKVDTFMMRFLEILNSFPFMFFVILLVTF
FGRNIFLIFVAIGMVSWLDMARIVRGQTLSLKQKEFIEAAIVCGVSSRQIVWRHIVPNVLGVVVVYASLLVPGMILFESF
LSFLGLGTQEPLSSWGGLLNDGAKSMEAAPWLLIFPALFLVITLFCFNFIGDGLRDALDPKDR

Sequences:

>Translated_303_residues
MLNNQKDTELLEAVTEKLDTLEGRSLWQDARRRFFHNKAALTSLFVLFCISLFVIFAPMLMPYPYDELDFGAISIPPEWE
TMHYFGTDASGRDLLVRVAIGGRISLLVGIAGALIAVLVGTLYGATSGYIGGKVDTFMMRFLEILNSFPFMFFVILLVTF
FGRNIFLIFVAIGMVSWLDMARIVRGQTLSLKQKEFIEAAIVCGVSSRQIVWRHIVPNVLGVVVVYASLLVPGMILFESF
LSFLGLGTQEPLSSWGGLLNDGAKSMEAAPWLLIFPALFLVITLFCFNFIGDGLRDALDPKDR
>Mature_303_residues
MLNNQKDTELLEAVTEKLDTLEGRSLWQDARRRFFHNKAALTSLFVLFCISLFVIFAPMLMPYPYDELDFGAISIPPEWE
TMHYFGTDASGRDLLVRVAIGGRISLLVGIAGALIAVLVGTLYGATSGYIGGKVDTFMMRFLEILNSFPFMFFVILLVTF
FGRNIFLIFVAIGMVSWLDMARIVRGQTLSLKQKEFIEAAIVCGVSSRQIVWRHIVPNVLGVVVVYASLLVPGMILFESF
LSFLGLGTQEPLSSWGGLLNDGAKSMEAAPWLLIFPALFLVITLFCFNFIGDGLRDALDPKDR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=303, Percent_Identity=77.5577557755775, Blast_Score=427, Evalue=1e-121,
Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=37.6344086021505, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=35.2490421455939, Blast_Score=167, Evalue=9e-43,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=34.8920863309352, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=32.3651452282158, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1788505, Length=246, Percent_Identity=34.1463414634146, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787549, Length=279, Percent_Identity=27.5985663082437, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33746; Mature: 33746

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNQKDTELLEAVTEKLDTLEGRSLWQDARRRFFHNKAALTSLFVLFCISLFVIFAPML
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPYPYDELDFGAISIPPEWETMHYFGTDASGRDLLVRVAIGGRISLLVGIAGALIAVLVG
CCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
TLYGATSGYIGGKVDTFMMRFLEILNSFPFMFFVILLVTFFGRNIFLIFVAIGMVSWLDM
HHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ARIVRGQTLSLKQKEFIEAAIVCGVSSRQIVWRHIVPNVLGVVVVYASLLVPGMILFESF
HHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFLGLGTQEPLSSWGGLLNDGAKSMEAAPWLLIFPALFLVITLFCFNFIGDGLRDALDP
HHHHCCCCCCHHHHHCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KDR
CCC
>Mature Secondary Structure
MLNNQKDTELLEAVTEKLDTLEGRSLWQDARRRFFHNKAALTSLFVLFCISLFVIFAPML
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPYPYDELDFGAISIPPEWETMHYFGTDASGRDLLVRVAIGGRISLLVGIAGALIAVLVG
CCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
TLYGATSGYIGGKVDTFMMRFLEILNSFPFMFFVILLVTFFGRNIFLIFVAIGMVSWLDM
HHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ARIVRGQTLSLKQKEFIEAAIVCGVSSRQIVWRHIVPNVLGVVVVYASLLVPGMILFESF
HHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFLGLGTQEPLSSWGGLLNDGAKSMEAAPWLLIFPALFLVITLFCFNFIGDGLRDALDP
HHHHCCCCCCHHHHHCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KDR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]