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The map label for this gene is oppA [H]

Identifier: 15603775

GI number: 15603775

Start: 2149439

End: 2151085

Strand: Reverse

Name: oppA [H]

Synonym: PM1910

Alternate gene names: 15603775

Gene position: 2151085-2149439 (Counterclockwise)

Preceding gene: 15603785

Following gene: 15603774

Centisome position: 95.29

GC content: 40.32

Gene sequence:

>1647_bases
ATGACAAACACAATGAAAAAAACAGGACTTAATGTGGCATTAGCAAGTATCTTTACGCTTTTTGCTACACAAACAACCTT
CGCAGCAGAAGTACCCGCGGGCACCGAATTAGCCGCCAAACAAGAATTACGTTGGAATATTGGCTCCAACCCTGCTTCAT
TAGATCCACATAAAATTGAAGGAACACCAGAAGGCTTTACCTCTCGTCAATTATTTGAAACCCTAGTGATCTCTGATGCA
GAAGGACATATTATCCCAGGTGCTGCGATCAAATGGGAACATAGCCCAGACTTTAAAAAATGGACATTCCATCTTCGTCC
AGACGCAAAATGGTCAAATGGTGAACCTGTCACAGCTGAAGATTTCGTTTTCTCTTTCCAACGTTTAGCCGATCCAAACA
CGGCATCACCTTATTCTAGCTATCTAAAATACCTCAAATTATTGAATGCAGAAGATGTCGTAGCGGGTAAAAAACCAATT
ACAGAACTCGGTGTTAAAGCACTCGATGCGCATACGTTAGAACTGACCTTATCGGCAAGCGTACCTTATGCAGATAAATT
AACCGAACATTATGTCTTAGCACCAGTCAACAAAAAATTAGTTGAACAATTCGGTGACAAATGGACAGATGTAAAAAATA
TCGTGGGTAACGGCGCATTTACAGTCAAAAATTGGACAATTAATGAAAAATTAGAATTAGTGCCAAACCCACATTATTGG
GATCATGCGAAAACCGTTTTAACAAGTGTAACACTGTACCCAATTGAATCAGAAAATACTGACGTGGCGCGTTATCGTGC
AGGGGATTTAGACATCACCAACCACGCCTTACCAGTCGAGCTGTTTAGTAAACTAAAACAAGAATACCCAAATGAAGTGT
ATACTCCTGCGTCACTTTGTACTTATTTGTATGAAATTAACCACAAGAAACCACCATTTGATGATGTACGTGTCAGAAAA
GCCCTTGCGATGGCACTCGATCGCGACATCATTACAGAAAAAGTGACAGCACAAGGTCAAGTACCGGCGTATAGCTTTAC
ACCGCCATATATTAACGGTGGTGAAAAAATCGAAAAACCAGACTGGGTCGCACTCCCGCAAGCTGAGCGTAATAAACAAG
CTGTAGCCTTGTTAAAAGAAGCAGGCTTTGATAAGAGCAATCCATTGAATTTCACATTGCTATACAACACTTCTGAAAAC
CACAAAAAAATTGCTTTAGCCGCCTCCTCATTGTGGCAAAAAAACCTCGCAGGTGCCGTGAAAGTGACGTTAGAAAACAA
AGAGTGGAAAACTTACTTAGATACACGTCATCAAGGTAACTATCAAGTAACGCGTGCAGGTTGGTGTGCGGACTATAATG
AAGCAAGTACTTTCTTAAATTACTTCTTATCAACCAGTAGTAATAACACGGCCTTCTATAAGAGTGCTGAATTTGACAAA
CTGCTTTCAGAAACGTACTTAGCTGAAACAGATGCTCAACGCGCAGAGATTTATGCCAAACTCGAAGCGCAACTTGCTAA
AGATGCTGCATTGGTTCCAGTCTATTACTATGTTGATCCACGTATGGTGAAACCTTATGTGAAAGGATTCCCAATCAATC
ATCCTGGTAAGAACTTCTATCTAAAAGATGTTTATTTAGTCAAATAA

Upstream 100 bases:

>100_bases
ATCAAAAATAGCTCACAAATAACACATTCGGCACTTTACAGTCTGATTTTTTTGCTTTATTAATAGAATTTCTTTTTACT
CATAAAATAAAGGGAAAACT

Downstream 100 bases:

>100_bases
TCATTTTGATATATTTTAGTGCGGTCACGACTTGGGTCACACCGACCGCACTTTTTTAGTTTTCGCACCTTGCGATCTAT
GGATTGGATTATCTTGTATG

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MTNTMKKTGLNVALASIFTLFATQTTFAAEVPAGTELAAKQELRWNIGSNPASLDPHKIEGTPEGFTSRQLFETLVISDA
EGHIIPGAAIKWEHSPDFKKWTFHLRPDAKWSNGEPVTAEDFVFSFQRLADPNTASPYSSYLKYLKLLNAEDVVAGKKPI
TELGVKALDAHTLELTLSASVPYADKLTEHYVLAPVNKKLVEQFGDKWTDVKNIVGNGAFTVKNWTINEKLELVPNPHYW
DHAKTVLTSVTLYPIESENTDVARYRAGDLDITNHALPVELFSKLKQEYPNEVYTPASLCTYLYEINHKKPPFDDVRVRK
ALAMALDRDIITEKVTAQGQVPAYSFTPPYINGGEKIEKPDWVALPQAERNKQAVALLKEAGFDKSNPLNFTLLYNTSEN
HKKIALAASSLWQKNLAGAVKVTLENKEWKTYLDTRHQGNYQVTRAGWCADYNEASTFLNYFLSTSSNNTAFYKSAEFDK
LLSETYLAETDAQRAEIYAKLEAQLAKDAALVPVYYYVDPRMVKPYVKGFPINHPGKNFYLKDVYLVK

Sequences:

>Translated_548_residues
MTNTMKKTGLNVALASIFTLFATQTTFAAEVPAGTELAAKQELRWNIGSNPASLDPHKIEGTPEGFTSRQLFETLVISDA
EGHIIPGAAIKWEHSPDFKKWTFHLRPDAKWSNGEPVTAEDFVFSFQRLADPNTASPYSSYLKYLKLLNAEDVVAGKKPI
TELGVKALDAHTLELTLSASVPYADKLTEHYVLAPVNKKLVEQFGDKWTDVKNIVGNGAFTVKNWTINEKLELVPNPHYW
DHAKTVLTSVTLYPIESENTDVARYRAGDLDITNHALPVELFSKLKQEYPNEVYTPASLCTYLYEINHKKPPFDDVRVRK
ALAMALDRDIITEKVTAQGQVPAYSFTPPYINGGEKIEKPDWVALPQAERNKQAVALLKEAGFDKSNPLNFTLLYNTSEN
HKKIALAASSLWQKNLAGAVKVTLENKEWKTYLDTRHQGNYQVTRAGWCADYNEASTFLNYFLSTSSNNTAFYKSAEFDK
LLSETYLAETDAQRAEIYAKLEAQLAKDAALVPVYYYVDPRMVKPYVKGFPINHPGKNFYLKDVYLVK
>Mature_547_residues
TNTMKKTGLNVALASIFTLFATQTTFAAEVPAGTELAAKQELRWNIGSNPASLDPHKIEGTPEGFTSRQLFETLVISDAE
GHIIPGAAIKWEHSPDFKKWTFHLRPDAKWSNGEPVTAEDFVFSFQRLADPNTASPYSSYLKYLKLLNAEDVVAGKKPIT
ELGVKALDAHTLELTLSASVPYADKLTEHYVLAPVNKKLVEQFGDKWTDVKNIVGNGAFTVKNWTINEKLELVPNPHYWD
HAKTVLTSVTLYPIESENTDVARYRAGDLDITNHALPVELFSKLKQEYPNEVYTPASLCTYLYEINHKKPPFDDVRVRKA
LAMALDRDIITEKVTAQGQVPAYSFTPPYINGGEKIEKPDWVALPQAERNKQAVALLKEAGFDKSNPLNFTLLYNTSENH
KKIALAASSLWQKNLAGAVKVTLENKEWKTYLDTRHQGNYQVTRAGWCADYNEASTFLNYFLSTSSNNTAFYKSAEFDKL
LSETYLAETDAQRAEIYAKLEAQLAKDAALVPVYYYVDPRMVKPYVKGFPINHPGKNFYLKDVYLVK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=548, Percent_Identity=55.6569343065693, Blast_Score=619, Evalue=1e-178,
Organism=Escherichia coli, GI87081878, Length=523, Percent_Identity=46.4627151051625, Blast_Score=464, Evalue=1e-132,
Organism=Escherichia coli, GI1789397, Length=530, Percent_Identity=40.188679245283, Blast_Score=395, Evalue=1e-111,
Organism=Escherichia coli, GI1787762, Length=480, Percent_Identity=28.3333333333333, Blast_Score=138, Evalue=1e-33,
Organism=Escherichia coli, GI1789966, Length=527, Percent_Identity=24.8576850094877, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1789887, Length=556, Percent_Identity=25.1798561151079, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787052, Length=564, Percent_Identity=23.0496453900709, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1787551, Length=496, Percent_Identity=22.7822580645161, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61629; Mature: 61498

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTMKKTGLNVALASIFTLFATQTTFAAEVPAGTELAAKQELRWNIGSNPASLDPHKIE
CCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHEECCCCCCCCCCCCCCC
GTPEGFTSRQLFETLVISDAEGHIIPGAAIKWEHSPDFKKWTFHLRPDAKWSNGEPVTAE
CCCCCCHHHHHHHHHHEECCCCCEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCHH
DFVFSFQRLADPNTASPYSSYLKYLKLLNAEDVVAGKKPITELGVKALDAHTLELTLSAS
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCHHHHCHHHHCCEEEEEEEECC
VPYADKLTEHYVLAPVNKKLVEQFGDKWTDVKNIVGNGAFTVKNWTINEKLELVPNPHYW
CCCHHHHCCCEEEECCCHHHHHHHCCHHHHHHHHHCCCEEEEEEEEECCEEEECCCCCCH
DHAKTVLTSVTLYPIESENTDVARYRAGDLDITNHALPVELFSKLKQEYPNEVYTPASLC
HHHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
TYLYEINHKKPPFDDVRVRKALAMALDRDIITEKVTAQGQVPAYSFTPPYINGGEKIEKP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
DWVALPQAERNKQAVALLKEAGFDKSNPLNFTLLYNTSENHKKIALAASSLWQKNLAGAV
CEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHCCCCEE
KVTLENKEWKTYLDTRHQGNYQVTRAGWCADYNEASTFLNYFLSTSSNNTAFYKSAEFDK
EEEEECCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHH
LLSETYLAETDAQRAEIYAKLEAQLAKDAALVPVYYYVDPRMVKPYVKGFPINHPGKNFY
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHCCCCCCCCCCCEE
LKDVYLVK
EEEEEEEC
>Mature Secondary Structure 
TNTMKKTGLNVALASIFTLFATQTTFAAEVPAGTELAAKQELRWNIGSNPASLDPHKIE
CCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHEECCCCCCCCCCCCCCC
GTPEGFTSRQLFETLVISDAEGHIIPGAAIKWEHSPDFKKWTFHLRPDAKWSNGEPVTAE
CCCCCCHHHHHHHHHHEECCCCCEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCHH
DFVFSFQRLADPNTASPYSSYLKYLKLLNAEDVVAGKKPITELGVKALDAHTLELTLSAS
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCHHHHCHHHHCCEEEEEEEECC
VPYADKLTEHYVLAPVNKKLVEQFGDKWTDVKNIVGNGAFTVKNWTINEKLELVPNPHYW
CCCHHHHCCCEEEECCCHHHHHHHCCHHHHHHHHHCCCEEEEEEEEECCEEEECCCCCCH
DHAKTVLTSVTLYPIESENTDVARYRAGDLDITNHALPVELFSKLKQEYPNEVYTPASLC
HHHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
TYLYEINHKKPPFDDVRVRKALAMALDRDIITEKVTAQGQVPAYSFTPPYINGGEKIEKP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
DWVALPQAERNKQAVALLKEAGFDKSNPLNFTLLYNTSENHKKIALAASSLWQKNLAGAV
CEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHCCCCEE
KVTLENKEWKTYLDTRHQGNYQVTRAGWCADYNEASTFLNYFLSTSSNNTAFYKSAEFDK
EEEEECCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHH
LLSETYLAETDAQRAEIYAKLEAQLAKDAALVPVYYYVDPRMVKPYVKGFPINHPGKNFY
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHCCCCCCCCCCCEE
LKDVYLVK
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821267; 3525163; 11677609; 8202710; 8747465; 10422831; 10438628 [H]