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The map label for this gene is yicC [C]

Identifier: 15603740

GI number: 15603740

Start: 2117857

End: 2118720

Strand: Reverse

Name: yicC [C]

Synonym: PM1875

Alternate gene names: 15603740

Gene position: 2118720-2117857 (Counterclockwise)

Preceding gene: 15603747

Following gene: 15603739

Centisome position: 93.85

GC content: 42.13

Gene sequence:

>864_bases
ATGATTTATAGTATGACCGCTTTTGCACGCCTCGAAATCAAACAGGATTGGGGTGATGCCGTGTGGGAAATTCGCTCAGT
TAACCAGCGCTATTTAGAAACCTTTTTCCGCTTGCCTGAGCAATTTCGTGGTTTAGAAAATACCTTGCGAGAAAAACTGC
GTCAAAAACTGACGCGTGGCAAAATTGAATGCACATTGCGTATTGATAATAAAAAACAAGCTGCCACAGAAATCCATTTA
AACAAAGCCTTTGCATTACAAGTGATACAGTCATTACAGTGGATCAAACAACAAGCCGGGGAAGGCGAGATTCACTTAAA
TGACGTGTTGCGCTATCCGGGCGTCGTTGAAGTACCAGAACAAGATCTTGATTTGATTAGCCAACAATTACTCAGCGCGT
TTGACAGCTTATTAACCGAGTTTATTGCAATGCGAGCAAGAGAGGGCGAAAAACTCAACACACTCCTTCAACAACGTTTA
GATGCCGTTGAAGTTGAAGCCAATAAAGTGCGGTCAAAAATGCCGGAAATTTTACAATGGCAACGAGATCGTTTATTACA
GCGCTTTGACGAAATCCAATTACAAGTGGATCCCCAACGTGTTGAGCAGGAAATGGTGTTATTAGCCCAACGGGTTGATG
TCGCTGAAGAACTCGATCGTCTGCAATTACACGTCAAAGAAACCAAAGCCATTTTACAAAAAGGCGGTGCGGTTGGCAGA
AAATTGGATTTTATGATGCAAGAACTTAACCGTGAATCAAATACGCTCGCGTCCAAATCTATCAGTACTGAAGTCACCAA
TTCTGCGGTTGAACTGAAAGTCCTTATCGAACAAATGCGTGAGCAAATTCAAAACTTAGAGTAA

Upstream 100 bases:

>100_bases
AAATTCGCAGTATTTTAGCACGCAAACTGACAGAAACGAAATTTACCAGTACAATAGTTCTGTTAAACACGACCTCTTTT
TATCACATTAAGGAACTCAC

Downstream 100 bases:

>100_bases
GGGAAAAGGACATGACTTATTCATTATTAACGGAAACCCAAGCACATGTGGTTTGCGATCTACAACAATACACGCTACTT
GAAATCCAAGGCGAAGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIYSMTAFARLEIKQDWGDAVWEIRSVNQRYLETFFRLPEQFRGLENTLREKLRQKLTRGKIECTLRIDNKKQAATEIHL
NKAFALQVIQSLQWIKQQAGEGEIHLNDVLRYPGVVEVPEQDLDLISQQLLSAFDSLLTEFIAMRAREGEKLNTLLQQRL
DAVEVEANKVRSKMPEILQWQRDRLLQRFDEIQLQVDPQRVEQEMVLLAQRVDVAEELDRLQLHVKETKAILQKGGAVGR
KLDFMMQELNRESNTLASKSISTEVTNSAVELKVLIEQMREQIQNLE

Sequences:

>Translated_287_residues
MIYSMTAFARLEIKQDWGDAVWEIRSVNQRYLETFFRLPEQFRGLENTLREKLRQKLTRGKIECTLRIDNKKQAATEIHL
NKAFALQVIQSLQWIKQQAGEGEIHLNDVLRYPGVVEVPEQDLDLISQQLLSAFDSLLTEFIAMRAREGEKLNTLLQQRL
DAVEVEANKVRSKMPEILQWQRDRLLQRFDEIQLQVDPQRVEQEMVLLAQRVDVAEELDRLQLHVKETKAILQKGGAVGR
KLDFMMQELNRESNTLASKSISTEVTNSAVELKVLIEQMREQIQNLE
>Mature_287_residues
MIYSMTAFARLEIKQDWGDAVWEIRSVNQRYLETFFRLPEQFRGLENTLREKLRQKLTRGKIECTLRIDNKKQAATEIHL
NKAFALQVIQSLQWIKQQAGEGEIHLNDVLRYPGVVEVPEQDLDLISQQLLSAFDSLLTEFIAMRAREGEKLNTLLQQRL
DAVEVEANKVRSKMPEILQWQRDRLLQRFDEIQLQVDPQRVEQEMVLLAQRVDVAEELDRLQLHVKETKAILQKGGAVGR
KLDFMMQELNRESNTLASKSISTEVTNSAVELKVLIEQMREQIQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=62.3693379790941, Blast_Score=355, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33482; Mature: 33482

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSMTAFARLEIKQDWGDAVWEIRSVNQRYLETFFRLPEQFRGLENTLREKLRQKLTRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KIECTLRIDNKKQAATEIHLNKAFALQVIQSLQWIKQQAGEGEIHLNDVLRYPGVVEVPE
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCEEECCH
QDLDLISQQLLSAFDSLLTEFIAMRAREGEKLNTLLQQRLDAVEVEANKVRSKMPEILQW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRDRLLQRFDEIQLQVDPQRVEQEMVLLAQRVDVAEELDRLQLHVKETKAILQKGGAVGR
HHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KLDFMMQELNRESNTLASKSISTEVTNSAVELKVLIEQMREQIQNLE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIYSMTAFARLEIKQDWGDAVWEIRSVNQRYLETFFRLPEQFRGLENTLREKLRQKLTRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KIECTLRIDNKKQAATEIHLNKAFALQVIQSLQWIKQQAGEGEIHLNDVLRYPGVVEVPE
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCEEECCH
QDLDLISQQLLSAFDSLLTEFIAMRAREGEKLNTLLQQRLDAVEVEANKVRSKMPEILQW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRDRLLQRFDEIQLQVDPQRVEQEMVLLAQRVDVAEELDRLQLHVKETKAILQKGGAVGR
HHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KLDFMMQELNRESNTLASKSISTEVTNSAVELKVLIEQMREQIQNLE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]