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The map label for this gene is ygfZ [C]

Identifier: 15603739

GI number: 15603739

Start: 2116961

End: 2117845

Strand: Reverse

Name: ygfZ [C]

Synonym: PM1874

Alternate gene names: 15603739

Gene position: 2117845-2116961 (Counterclockwise)

Preceding gene: 15603740

Following gene: 15603737

Centisome position: 93.81

GC content: 40.0

Gene sequence:

>885_bases
ATGACTTATTCATTATTAACGGAAACCCAAGCACATGTGGTTTGCGATCTACAACAATACACGCTACTTGAAATCCAAGG
CGAAGATGCCGAAAAATATTTACAAGGTCAGCTCACTTGCGACGTTAACAAATTAGCGGTAGGAGAATCTACTCTTGCAG
CCCATTGTGATGCAAAAGGAAAAATCAATTCGCTTTTTCGCTTAATTCGTACGGCTCCGCAGACGTTCTACTTACTGGTC
AAAAAAGGGCTGTTGCCAACGGCGCTTGACCAATTGAAAAAATATGCGGTTTTTTCTAAAGTGACTTTTACCCCATGTGA
TTGGCAAATTATTGGCTTAGCTGGAGAGAAAATCATCAATGCCTGCGATGAAATCGACGCACAAATACGTGTAACCTTAT
CCAGTCAACAACCACGTGTCATTTTAATCCACCCAACAGCATTAGATTTGCAAGCCAATGCTAGCCATGTGGTATGGGAT
TTATTGGATATTCAAGATGGCATCCCTTTATTAAGCCCTGAAACGCAAGCGGAGTTTATTCCACAAGCATTAAACTTACA
ATGTTTAGAACACGCTATTTCATTCCAAAAAGGTTGCTATATTGGACAAGAAATTGTCGCCAGAGCAAAATACCGTGGTG
CGAATAAACGCGCGATGTTTACTTTTGTAGCTCAAAGTCAAGAAATGCCAAATATCAAAAGTGAAGTTGAAATGCAATTG
GAAAACCATTGGCGTAAAACGGGTAATATCATTAGCGCGGTGAATTTTGAGGGCACTTTATGGTTACAAGTGGTGTTAAA
CAATCAGCTTGAAGAAGACGTCCAATTTCGTTTATCAGAACATACAGCTTTAACCCGGTTTCCCTTGCCTTATACATTAA
GTTAG

Upstream 100 bases:

>100_bases
AATCTATCAGTACTGAAGTCACCAATTCTGCGGTTGAACTGAAAGTCCTTATCGAACAAATGCGTGAGCAAATTCAAAAC
TTAGAGTAAGGGAAAAGGAC

Downstream 100 bases:

>100_bases
TTAACATTCAGGCACAAAAAAGCAGATCATATGATCTGCTTTTTTAATACTCACAATAAACTTAATGTGCTTTCACTTTC
ATTTGCGCTTGCGCTTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTYSLLTETQAHVVCDLQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKGKINSLFRLIRTAPQTFYLLV
KKGLLPTALDQLKKYAVFSKVTFTPCDWQIIGLAGEKIINACDEIDAQIRVTLSSQQPRVILIHPTALDLQANASHVVWD
LLDIQDGIPLLSPETQAEFIPQALNLQCLEHAISFQKGCYIGQEIVARAKYRGANKRAMFTFVAQSQEMPNIKSEVEMQL
ENHWRKTGNIISAVNFEGTLWLQVVLNNQLEEDVQFRLSEHTALTRFPLPYTLS

Sequences:

>Translated_294_residues
MTYSLLTETQAHVVCDLQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKGKINSLFRLIRTAPQTFYLLV
KKGLLPTALDQLKKYAVFSKVTFTPCDWQIIGLAGEKIINACDEIDAQIRVTLSSQQPRVILIHPTALDLQANASHVVWD
LLDIQDGIPLLSPETQAEFIPQALNLQCLEHAISFQKGCYIGQEIVARAKYRGANKRAMFTFVAQSQEMPNIKSEVEMQL
ENHWRKTGNIISAVNFEGTLWLQVVLNNQLEEDVQFRLSEHTALTRFPLPYTLS
>Mature_293_residues
TYSLLTETQAHVVCDLQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKGKINSLFRLIRTAPQTFYLLVK
KGLLPTALDQLKKYAVFSKVTFTPCDWQIIGLAGEKIINACDEIDAQIRVTLSSQQPRVILIHPTALDLQANASHVVWDL
LDIQDGIPLLSPETQAEFIPQALNLQCLEHAISFQKGCYIGQEIVARAKYRGANKRAMFTFVAQSQEMPNIKSEVEMQLE
NHWRKTGNIISAVNFEGTLWLQVVLNNQLEEDVQFRLSEHTALTRFPLPYTLS

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygfZ (UP14) and B.aphidicola (subsp. Acyrthosiphon pisum) BU435 [H]

Homologues:

Organism=Escherichia coli, GI1789265, Length=307, Percent_Identity=38.4364820846906, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 33076; Mature: 32945

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYSLLTETQAHVVCDLQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKG
CCCEEECCCCCEEEEECCCEEEEEEECCCHHHHHCCCEEECCHHEECCCCHHEECCCCCC
KINSLFRLIRTAPQTFYLLVKKGLLPTALDQLKKYAVFSKVTFTPCDWQIIGLAGEKIIN
CHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCEEEEEECHHHHHH
ACDEIDAQIRVTLSSQQPRVILIHPTALDLQANASHVVWDLLDIQDGIPLLSPETQAEFI
HHHHCCCEEEEEEECCCCEEEEECCCEEECCCCCCCCEEEEEHHCCCCCCCCCCHHHHHH
PQALNLQCLEHAISFQKGCYIGQEIVARAKYRGANKRAMFTFVAQSQEMPNIKSEVEMQL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH
ENHWRKTGNIISAVNFEGTLWLQVVLNNQLEEDVQFRLSEHTALTRFPLPYTLS
HHHHHHCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCC
>Mature Secondary Structure 
TYSLLTETQAHVVCDLQQYTLLEIQGEDAEKYLQGQLTCDVNKLAVGESTLAAHCDAKG
CCEEECCCCCEEEEECCCEEEEEEECCCHHHHHCCCEEECCHHEECCCCHHEECCCCCC
KINSLFRLIRTAPQTFYLLVKKGLLPTALDQLKKYAVFSKVTFTPCDWQIIGLAGEKIIN
CHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCEEEEEECHHHHHH
ACDEIDAQIRVTLSSQQPRVILIHPTALDLQANASHVVWDLLDIQDGIPLLSPETQAEFI
HHHHCCCEEEEEEECCCCEEEEECCCEEECCCCCCCCEEEEEHHCCCCCCCCCCHHHHHH
PQALNLQCLEHAISFQKGCYIGQEIVARAKYRGANKRAMFTFVAQSQEMPNIKSEVEMQL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH
ENHWRKTGNIISAVNFEGTLWLQVVLNNQLEEDVQFRLSEHTALTRFPLPYTLS
HHHHHHCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]