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The map label for this gene is codA [C]

Identifier: 15603747

GI number: 15603747

Start: 2123553

End: 2124542

Strand: Reverse

Name: codA [C]

Synonym: PM1882

Alternate gene names: 15603747

Gene position: 2124542-2123553 (Counterclockwise)

Preceding gene: 15603748

Following gene: 15603740

Centisome position: 94.11

GC content: 42.83

Gene sequence:

>990_bases
ATGAAAAACCACGTTCGTAGTTTTAAAACCTATATTCGAGATGAAATCATTAAAAAAGGCGGTTGGGTCAATGCACATGC
GCATGCCGATCGCGCCTTTACCATGACCCCGGAAAAAATCAGCATTTACCATACAAGTAATCTGCAACAAAAATGGGATT
TAGTGGATGAAGTCAAGCGAACATCCAGTGTAGATGACTATTATGCGCGTTTTTGCCAGTCCATTGAATTAATGATTTCG
CAAGGTGTCACTGCTTTCGGCACTTTTGTAGATATCGATCCGATCTGTGAAGACCGTGCAATTATTGCGGCACACAAAGC
ACGAGAAGTGTACAAACACGATATCACGTTAAAATTTGCTAACCAAACGTTAAAAGGTGTAATTGAGCCCACCGCACGAA
AATGGTTCGATATTGGTTCAGAAATGGTGGATATGATTGGTGGTTTACCGTATCGCGATGAACTGGATTATGGTCGTGGC
TTAGAAGCAATGGATATCTTATTGGATACCGCCAAATCGCGTGGCATTATGTGTCATGTACACGTGGATCAATTTAATAC
CCCAAAAGAAAAAGAAACCGAACAGCTCTGTGATAAAACCATTGAACATGGCATGCAGGGGCGTGTTGTTGCTATCCATG
GTATTTCTATCGGTGCCCATTCAAAAGATTACCGCTACCGTTTATACGAAAAAATGCGCCAAGCACAAATGATGATGATT
GCCTGCCCAATGGCGTGGATTGACAGTAATCGTAAAGAAGATCTAATGCCATTCCACAACGCCCTCACCCCTGCCGATGA
AATGATTCCTGAAGGTATTACTGTCGCGATTGGTACCGATAATATCTGCGATTACATGGTGCCATTATGTGAAGGCGATA
TGTGGCAAGAACTCAGTTTATTAGCCGCGGGTTGTCGCTTCCCTGACTTAGAGGCGATGGTGAATATTGCGAGTATCAAT
GGCAGGAAAGTACTCGGTTTAGAAGTATAA

Upstream 100 bases:

>100_bases
TATCTGTTTTTAATGAATAACCGATCCTCATTTATTGGGGATTTTTTTATGTCTCGCCTTCCTCACTTACCTCTCACTTT
TACGTCCTCACGGAGCGATT

Downstream 100 bases:

>100_bases
TCCTCAACAAAAAGCGAACAAAAGATCCGCTTTTGACATGTCAATATTGATAAAACACACCGCACTTTTAGACTTCGCCA
TCAAAGCATGCTCTTGCAAA

Product: hypothetical protein

Products: ammonia; Uracil [C]

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKNHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKISIYHTSNLQQKWDLVDEVKRTSSVDDYYARFCQSIELMIS
QGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDITLKFANQTLKGVIEPTARKWFDIGSEMVDMIGGLPYRDELDYGRG
LEAMDILLDTAKSRGIMCHVHVDQFNTPKEKETEQLCDKTIEHGMQGRVVAIHGISIGAHSKDYRYRLYEKMRQAQMMMI
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVAIGTDNICDYMVPLCEGDMWQELSLLAAGCRFPDLEAMVNIASIN
GRKVLGLEV

Sequences:

>Translated_329_residues
MKNHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKISIYHTSNLQQKWDLVDEVKRTSSVDDYYARFCQSIELMIS
QGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDITLKFANQTLKGVIEPTARKWFDIGSEMVDMIGGLPYRDELDYGRG
LEAMDILLDTAKSRGIMCHVHVDQFNTPKEKETEQLCDKTIEHGMQGRVVAIHGISIGAHSKDYRYRLYEKMRQAQMMMI
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVAIGTDNICDYMVPLCEGDMWQELSLLAAGCRFPDLEAMVNIASIN
GRKVLGLEV
>Mature_329_residues
MKNHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKISIYHTSNLQQKWDLVDEVKRTSSVDDYYARFCQSIELMIS
QGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDITLKFANQTLKGVIEPTARKWFDIGSEMVDMIGGLPYRDELDYGRG
LEAMDILLDTAKSRGIMCHVHVDQFNTPKEKETEQLCDKTIEHGMQGRVVAIHGISIGAHSKDYRYRLYEKMRQAQMMMI
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVAIGTDNICDYMVPLCEGDMWQELSLLAAGCRFPDLEAMVNIASIN
GRKVLGLEV

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=292, Percent_Identity=22.6027397260274, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.1 [C]

Molecular weight: Translated: 37401; Mature: 37401

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKISIYHTSNLQQKWDLVDEVKR
CCCHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHH
TSSVDDYYARFCQSIELMISQGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDITLKFA
HCCCHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEC
NQTLKGVIEPTARKWFDIGSEMVDMIGGLPYRDELDYGRGLEAMDILLDTAKSRGIMCHV
CHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
HVDQFNTPKEKETEQLCDKTIEHGMQGRVVAIHGISIGAHSKDYRYRLYEKMRQAQMMMI
EECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVAIGTDNICDYMVPLCEGDMWQELSL
HCCHHHHCCCCCCCCCHHHHCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHH
LAAGCRFPDLEAMVNIASINGRKVLGLEV
HHHCCCCCCHHHHEEEEECCCCEEEEECC
>Mature Secondary Structure
MKNHVRSFKTYIRDEIIKKGGWVNAHAHADRAFTMTPEKISIYHTSNLQQKWDLVDEVKR
CCCHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHH
TSSVDDYYARFCQSIELMISQGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDITLKFA
HCCCHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEC
NQTLKGVIEPTARKWFDIGSEMVDMIGGLPYRDELDYGRGLEAMDILLDTAKSRGIMCHV
CHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
HVDQFNTPKEKETEQLCDKTIEHGMQGRVVAIHGISIGAHSKDYRYRLYEKMRQAQMMMI
EECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
ACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVAIGTDNICDYMVPLCEGDMWQELSL
HCCHHHHCCCCCCCCCHHHHCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHH
LAAGCRFPDLEAMVNIASINGRKVLGLEV
HHHCCCCCCHHHHEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Cytosine; H+; H2O [C]

Specific reaction: Cytosine + H+ + H2O --> ammonia + Uracil [C]

General reaction: Amidine hydrolysis [C]

Inhibitor: 5-Bromo-2-pyrimidone; CDP; CMP; CTP; GDP; GMP; GTP; Guanosine; Thymidine; TTP [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]