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The map label for this gene is lppB

Identifier: 15603478

GI number: 15603478

Start: 1822769

End: 1823344

Strand: Direct

Name: lppB

Synonym: PM1613

Alternate gene names: NA

Gene position: 1822769-1823344 (Clockwise)

Preceding gene: 15603477

Following gene: 15603479

Centisome position: 80.74

GC content: 41.32

Gene sequence:

>576_bases
TTGAAAATTTTTGGTGCGATGTATGATAAAACGATGGCTTGGTCAAAGCATCGTTATGCCACATTTTTTTTAGCGTTGAC
GAGTTTTATTGAGGCGATTTTTTTCCCGATTCCGCCGGATGTGATGTTGATTCCCATGTCAATTTCTCAACCACAACGTG
CCTTGAAACTGGCGTTTTATACGGCAGTTGCTTCTGTATTAGGTGGTGTGATTGGTTATGGTTTAGGCTATTATGCCGTT
GATTTTGTGCAACATTATGTCCAGCAATTTGGTTACCAACAACATTGGGAAACTGCGATTTCATGGTTTGAGAAATGGGG
TATCTTAGTGGTTTTTGTGGCAGGTTTTTCGCCGATTCCTTATAAGGTTTTCACCATTTGTGCAGGTGTGATGCAAATGC
TGTTTCTCCCATTTGTGCTGACGGCATTTATTTCGCGTGCAGCACGTTTTATTTTGGTCGCAAAACTTGCTGCATGGGGT
GGCGAAAAATTTGCGGATAAGTTGCGCCGTTCTATTGAATTGATTGGTTGGTCTGTCGTGCTGATTGCCGTTATCGCGTA
TTTAATTTTAAGATAA

Upstream 100 bases:

>100_bases
AGCAGATATGACCGCCTATCATTCATTGCAATCTTTACAAGATTGGTTAGAAAGTGAATAATAATCCGTTTTTTATTCTT
TATGATGAGGAAGGTGCGCG

Downstream 100 bases:

>100_bases
GGTAAAGTAAAAAATGAATAAATTACTTTTCTTGTTGTCTATGCTTTTAGTGTTAAGTGCTTGTACAACAAACATTCAAG
ATGAAAATGCATTAAGCCCG

Product: LppB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKIFGAMYDKTMAWSKHRYATFFLALTSFIEAIFFPIPPDVMLIPMSISQPQRALKLAFYTAVASVLGGVIGYGLGYYAV
DFVQHYVQQFGYQQHWETAISWFEKWGILVVFVAGFSPIPYKVFTICAGVMQMLFLPFVLTAFISRAARFILVAKLAAWG
GEKFADKLRRSIELIGWSVVLIAVIAYLILR

Sequences:

>Translated_191_residues
MKIFGAMYDKTMAWSKHRYATFFLALTSFIEAIFFPIPPDVMLIPMSISQPQRALKLAFYTAVASVLGGVIGYGLGYYAV
DFVQHYVQQFGYQQHWETAISWFEKWGILVVFVAGFSPIPYKVFTICAGVMQMLFLPFVLTAFISRAARFILVAKLAAWG
GEKFADKLRRSIELIGWSVVLIAVIAYLILR
>Mature_191_residues
MKIFGAMYDKTMAWSKHRYATFFLALTSFIEAIFFPIPPDVMLIPMSISQPQRALKLAFYTAVASVLGGVIGYGLGYYAV
DFVQHYVQQFGYQQHWETAISWFEKWGILVVFVAGFSPIPYKVFTICAGVMQMLFLPFVLTAFISRAARFILVAKLAAWG
GEKFADKLRRSIELIGWSVVLIAVIAYLILR

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21647; Mature: 21647

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFGAMYDKTMAWSKHRYATFFLALTSFIEAIFFPIPPDVMLIPMSISQPQRALKLAFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
TAVASVLGGVIGYGLGYYAVDFVQHYVQQFGYQQHWETAISWFEKWGILVVFVAGFSPIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YKVFTICAGVMQMLFLPFVLTAFISRAARFILVAKLAAWGGEKFADKLRRSIELIGWSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LIAVIAYLILR
HHHHHHHHHCC
>Mature Secondary Structure
MKIFGAMYDKTMAWSKHRYATFFLALTSFIEAIFFPIPPDVMLIPMSISQPQRALKLAFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
TAVASVLGGVIGYGLGYYAVDFVQHYVQQFGYQQHWETAISWFEKWGILVVFVAGFSPIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YKVFTICAGVMQMLFLPFVLTAFISRAARFILVAKLAAWGGEKFADKLRRSIELIGWSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LIAVIAYLILR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]