| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yggL [C]
Identifier: 15603181
GI number: 15603181
Start: 1509217
End: 1509561
Strand: Reverse
Name: yggL [C]
Synonym: PM1316
Alternate gene names: 15603181
Gene position: 1509561-1509217 (Counterclockwise)
Preceding gene: 15603182
Following gene: 15603180
Centisome position: 66.87
GC content: 40.87
Gene sequence:
>345_bases ATGGCGATTAAACGTAACAGAAGACAACGTAAAAAAATGCACCTTGCTGAATTCCAAGAACTAGGTTTCTTAGTGAATTG GCAATTTGCAGAAGGTACGGCCATCGAGAAAGTTGATGAAGTGGTTGATCGCTTTATTTGTGAGGTAATCCAGCCAAACG GTCTTGCTTATGAAGGCAGTGGTTACTTACATTGGGAAGGTTTAGTCTGCTTAGAAGCCCTAGGCAAATGTGATGAAAGC CATCGCACCTTAGTCAAAGAATGGTTAGAGCAAAACGGCTTACAACAAATCGAAATCAGCCCATTATTTGATATCTGGTG GGAATATCCAGCAAAAGATGCATAA
Upstream 100 bases:
>100_bases TACTACATCAAAAAATAAAAAAACAAGCCCGCACTTTTTGAACAAAAGTCTGGCATAATGTAAGACAAATTTTATCAGCC AACAGAGAGGAGAATCGAAC
Downstream 100 bases:
>100_bases TCCTTTTATGCGAGGCGAACTGTTTAGTTCGCCTTTTTCATTTTGCCATGCATAAGAATTCCACATTAGTGCGCATAAAA CCTTGACGAAGCCAGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MAIKRNRRQRKKMHLAEFQELGFLVNWQFAEGTAIEKVDEVVDRFICEVIQPNGLAYEGSGYLHWEGLVCLEALGKCDES HRTLVKEWLEQNGLQQIEISPLFDIWWEYPAKDA
Sequences:
>Translated_114_residues MAIKRNRRQRKKMHLAEFQELGFLVNWQFAEGTAIEKVDEVVDRFICEVIQPNGLAYEGSGYLHWEGLVCLEALGKCDES HRTLVKEWLEQNGLQQIEISPLFDIWWEYPAKDA >Mature_113_residues AIKRNRRQRKKMHLAEFQELGFLVNWQFAEGTAIEKVDEVVDRFICEVIQPNGLAYEGSGYLHWEGLVCLEALGKCDESH RTLVKEWLEQNGLQQIEISPLFDIWWEYPAKDA
Specific function: Unknown
COG id: COG3171
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yggL [H]
Homologues:
Organism=Escherichia coli, GI87082190, Length=108, Percent_Identity=57.4074074074074, Blast_Score=143, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007416 [H]
Pfam domain/function: PF04320 DUF469 [H]
EC number: NA
Molecular weight: Translated: 13352; Mature: 13221
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKRNRRQRKKMHLAEFQELGFLVNWQFAEGTAIEKVDEVVDRFICEVIQPNGLAYEGS CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCC GYLHWEGLVCLEALGKCDESHRTLVKEWLEQNGLQQIEISPLFDIWWEYPAKDA CEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCC >Mature Secondary Structure AIKRNRRQRKKMHLAEFQELGFLVNWQFAEGTAIEKVDEVVDRFICEVIQPNGLAYEGS CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCC GYLHWEGLVCLEALGKCDESHRTLVKEWLEQNGLQQIEISPLFDIWWEYPAKDA CEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]