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The map label for this gene is ycdQ [C]

Identifier: 15602642

GI number: 15602642

Start: 920650

End: 922083

Strand: Direct

Name: ycdQ [C]

Synonym: PM0777

Alternate gene names: 15602642

Gene position: 920650-922083 (Clockwise)

Preceding gene: 15602641

Following gene: 15602643

Centisome position: 40.78

GC content: 34.24

Gene sequence:

>1434_bases
ATGCTTAACCTGTTTAAAATCATAAAAAAGTATGTGCATATTCAATCTTTATTACACAAAAAAGAATATGCCTTACTTTA
TGCTAAATACATAAACCAGCTTTCTATCAACCAGCAGGCTTATGTTATTTGTCAACTCAAACTCTATGATCTCTTTCTGA
TTGATCCTAAATGGAGCCACTCTGTTTTTTTCCAGTTAGGATTAATTGCTCGTGGACACGATCATGATAGCGATGAAATG
GTACGTCGTTTGATCACTTGCACTGATTTTAGCAAAAATAAGCAGTTAATCCTTTCTCAATTACTTGCTTATTCACCTCA
AATTGCAACAACATTATGTCCACAGACATATCGTTATCGTGCGCTATATCTCTCATTACTAGCGAATTTAAAAGACTTTG
TTCGTTTAAAAGAAGAACTCAATAAGTTGCCGTCATGTGTGTTAAAGAATACACCTCATTACTGTTTGTTACAGAATTTT
GTCGAAAAAGAAAACAGCAAGAAATTAGAGAACATTAATCAATTTCTTTACTTTTATAAACTTGGAGAAATAACTACGAT
AAAGACAGAAGATCCACCTAATACTAATAATATAGTCAGTCATTCGATAGTTAATGACACAAACACCTACTTAAATGCCC
CTTTAATTACCATATTAGTGACGACATTTAACAGTCAAAAAAGTATAAAAAACACATTAAATTCATTGTTCAATCAAAGC
TATCCAAATATTGAAATTATCGTTATTGATGATCATAGCCAAGATAATACGATGAGTATTCTCCAGGCTTATACTAAGCA
ATATAAAAATATCAAAATCATTAGCTTAAAAGAAAATGTCGGGACTTATGTCGCAAAAAATATTGGGCTTAAATACGCCT
CTGGCGAATTCATCACTTGTCAAGATTCCGATGATTGGGCACACCCACAAAAATTGGCACTTCAGGTGGCTCCTTTATTA
CAACATAAAGAGTTAATTGTAACTTTTTCTAAGTGGGTAAGGCTCGATCCAATAGGGAATCCTTATGCCCGTACTATTTA
TCCATTAATGCGTTTAAACCCTTCTTCCGCATTATTCCGTAAAAAAGAAGTGTGTGAAAAAACTGCATTATGGGATTGGG
TAAGAATCGGTGCAGATAGCGAATTTAATGCACGCTTAAAATTAATTTTTGGACACAAAGGCTATTACACCGTGAATAAA
CCTTTGACATTCGGTGCACATCGAGAAAATTCATTAATGACAGCTCAAAGTACTGGCTATGTCAATGGCGTCTCCCTACC
TCGTGAAGCATATTGGAAAGCATGGAATATCTGGCATATCTCACAATTACAGCGAGGACACGCCCCTCTTTTATCTTCCT
CTCCTAAACGAGAATTTTTTCAATATGACCAACATCCGATCATGGATGTTATTTCTTATGCAATCATTAATTAA

Upstream 100 bases:

>100_bases
GAATTTATTAATCGCTCTGATGTCATTCTCGCTAATCGTTCTGAGCCAGATTTAAATCAATGTTCCCATAAAATCTATAC
AAGAGATATTTTTGGCGGTG

Downstream 100 bases:

>100_bases
ATCTTAAGAGAGATTATTATGAAACCAATAAAAACATTATCTATTTCTTTTATCACAACGCTCATCCTCGCTGGCTGTCA
TAGCATGCCAACTTCGGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MLNLFKIIKKYVHIQSLLHKKEYALLYAKYINQLSINQQAYVICQLKLYDLFLIDPKWSHSVFFQLGLIARGHDHDSDEM
VRRLITCTDFSKNKQLILSQLLAYSPQIATTLCPQTYRYRALYLSLLANLKDFVRLKEELNKLPSCVLKNTPHYCLLQNF
VEKENSKKLENINQFLYFYKLGEITTIKTEDPPNTNNIVSHSIVNDTNTYLNAPLITILVTTFNSQKSIKNTLNSLFNQS
YPNIEIIVIDDHSQDNTMSILQAYTKQYKNIKIISLKENVGTYVAKNIGLKYASGEFITCQDSDDWAHPQKLALQVAPLL
QHKELIVTFSKWVRLDPIGNPYARTIYPLMRLNPSSALFRKKEVCEKTALWDWVRIGADSEFNARLKLIFGHKGYYTVNK
PLTFGAHRENSLMTAQSTGYVNGVSLPREAYWKAWNIWHISQLQRGHAPLLSSSPKREFFQYDQHPIMDVISYAIIN

Sequences:

>Translated_477_residues
MLNLFKIIKKYVHIQSLLHKKEYALLYAKYINQLSINQQAYVICQLKLYDLFLIDPKWSHSVFFQLGLIARGHDHDSDEM
VRRLITCTDFSKNKQLILSQLLAYSPQIATTLCPQTYRYRALYLSLLANLKDFVRLKEELNKLPSCVLKNTPHYCLLQNF
VEKENSKKLENINQFLYFYKLGEITTIKTEDPPNTNNIVSHSIVNDTNTYLNAPLITILVTTFNSQKSIKNTLNSLFNQS
YPNIEIIVIDDHSQDNTMSILQAYTKQYKNIKIISLKENVGTYVAKNIGLKYASGEFITCQDSDDWAHPQKLALQVAPLL
QHKELIVTFSKWVRLDPIGNPYARTIYPLMRLNPSSALFRKKEVCEKTALWDWVRIGADSEFNARLKLIFGHKGYYTVNK
PLTFGAHRENSLMTAQSTGYVNGVSLPREAYWKAWNIWHISQLQRGHAPLLSSSPKREFFQYDQHPIMDVISYAIIN
>Mature_477_residues
MLNLFKIIKKYVHIQSLLHKKEYALLYAKYINQLSINQQAYVICQLKLYDLFLIDPKWSHSVFFQLGLIARGHDHDSDEM
VRRLITCTDFSKNKQLILSQLLAYSPQIATTLCPQTYRYRALYLSLLANLKDFVRLKEELNKLPSCVLKNTPHYCLLQNF
VEKENSKKLENINQFLYFYKLGEITTIKTEDPPNTNNIVSHSIVNDTNTYLNAPLITILVTTFNSQKSIKNTLNSLFNQS
YPNIEIIVIDDHSQDNTMSILQAYTKQYKNIKIISLKENVGTYVAKNIGLKYASGEFITCQDSDDWAHPQKLALQVAPLL
QHKELIVTFSKWVRLDPIGNPYARTIYPLMRLNPSSALFRKKEVCEKTALWDWVRIGADSEFNARLKLIFGHKGYYTVNK
PLTFGAHRENSLMTAQSTGYVNGVSLPREAYWKAWNIWHISQLQRGHAPLLSSSPKREFFQYDQHPIMDVISYAIIN

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=132, Percent_Identity=30.3030303030303, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790044, Length=94, Percent_Identity=28.7234042553192, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 55276; Mature: 55276

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLFKIIKKYVHIQSLLHKKEYALLYAKYINQLSINQQAYVICQLKLYDLFLIDPKWSH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCC
SVFFQLGLIARGHDHDSDEMVRRLITCTDFSKNKQLILSQLLAYSPQIATTLCPQTYRYR
HHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHH
ALYLSLLANLKDFVRLKEELNKLPSCVLKNTPHYCLLQNFVEKENSKKLENINQFLYFYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHEEE
LGEITTIKTEDPPNTNNIVSHSIVNDTNTYLNAPLITILVTTFNSQKSIKNTLNSLFNQS
ECCEEEEECCCCCCCCCCEEHHEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCC
YPNIEIIVIDDHSQDNTMSILQAYTKQYKNIKIISLKENVGTYVAKNIGLKYASGEFITC
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCEECCCCEEEE
QDSDDWAHPQKLALQVAPLLQHKELIVTFSKWVRLDPIGNPYARTIYPLMRLNPSSALFR
CCCCCCCCHHHHHHHHHHHHCCHHHEEEEEHHEEECCCCCCHHHHHHHHHHCCCHHHHHH
KKEVCEKTALWDWVRIGADSEFNARLKLIFGHKGYYTVNKPLTFGAHRENSLMTAQSTGY
HHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCEEEECCCEEECCCCCCCEEEECCCCC
VNGVSLPREAYWKAWNIWHISQLQRGHAPLLSSSPKREFFQYDQHPIMDVISYAIIN
CCCCCCCHHHHHCCCCEEEHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLNLFKIIKKYVHIQSLLHKKEYALLYAKYINQLSINQQAYVICQLKLYDLFLIDPKWSH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCC
SVFFQLGLIARGHDHDSDEMVRRLITCTDFSKNKQLILSQLLAYSPQIATTLCPQTYRYR
HHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHH
ALYLSLLANLKDFVRLKEELNKLPSCVLKNTPHYCLLQNFVEKENSKKLENINQFLYFYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHEEE
LGEITTIKTEDPPNTNNIVSHSIVNDTNTYLNAPLITILVTTFNSQKSIKNTLNSLFNQS
ECCEEEEECCCCCCCCCCEEHHEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCC
YPNIEIIVIDDHSQDNTMSILQAYTKQYKNIKIISLKENVGTYVAKNIGLKYASGEFITC
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCEECCCCEEEE
QDSDDWAHPQKLALQVAPLLQHKELIVTFSKWVRLDPIGNPYARTIYPLMRLNPSSALFR
CCCCCCCCHHHHHHHHHHHHCCHHHEEEEEHHEEECCCCCCHHHHHHHHHHCCCHHHHHH
KKEVCEKTALWDWVRIGADSEFNARLKLIFGHKGYYTVNKPLTFGAHRENSLMTAQSTGY
HHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCEEEECCCEEECCCCCCCEEEECCCCC
VNGVSLPREAYWKAWNIWHISQLQRGHAPLLSSSPKREFFQYDQHPIMDVISYAIIN
CCCCCCCHHHHHCCCCEEEHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]