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The map label for this gene is ygiF [C]

Identifier: 15602116

GI number: 15602116

Start: 281800

End: 282870

Strand: Direct

Name: ygiF [C]

Synonym: PM0251

Alternate gene names: 15602116

Gene position: 281800-282870 (Clockwise)

Preceding gene: 15602108

Following gene: 15602117

Centisome position: 12.48

GC content: 38.56

Gene sequence:

>1071_bases
ATGGGGAATGAAGTCGAGTTAAAATTAGCTGTGACGCCCAAGTTTGCTGATTTATTACATCAAGAATTAACGAATTTTCG
TATTCTTGCGCATAACACAATCTTTTTGGCAAATACTTATTACGATACCGCGGATCGCGTCTTAGCAAAACACAAAATGG
GGCTACGTGTACGGCAAGAAAATCAACAATACACGCTCACATTAAAAACGGATGGTGAGGTTCACGGCGGTTTGCATATC
CGCCCTGAATATAATGTTACTTTGCCTGATGCGCAGCCAAACATATCGTTATTAGTTGAAAAATATGCTTTAACATTGCC
GAATTATGCACAATGGGAATTAAAGCCTGTATTTAGTACAGACTTTGAACGTGAGAGTTGGTTAATCGAATGTGGTAACG
GAACTCATATTGAAGTGGCGTTTGATCAAGGTAAAATTGTCGCGGGAGAAAAACAGACACCGATTTGTGAAGTTGAATTT
GAATTAAAGTCAGGTCTTCCTATTGATTTACTTCGTTTTGTCCAAACGCTTACATTAGAAAACGAGATCCGTTTAAGTTC
AGCGTCAAAAGCAAAAAGAGGTTATCTTTTAGCAAATCCGACTTCCATGACAGTAACGAACTGGTTAGAGAAGTGGCGCG
AGTTTCTACAATTTACACAAAACATGACAAGTGCCTTGGCTAAATTGAGAGCATTATTTCGCTTAGAACAAGACTTAATT
GAAGAAACCTTTGCAATTGGAGCAGACTATTTTGCTGCAGATTTCTTGCGTACAGTAGAGCGGATTGGCGCGTTCTTTAA
TCTCTATCACTATTATGTTGAACAGGCAACGTTGTTAGACAGCGCGTTAAATCAACAGGTCGGCGAGGAGAATCTTGCGT
GTGAACAAACATATTTACTGGACTTGTTAGACAGTCATCACAGTTTATTACAACAAGTACGTGAATTGATTCGTTTGCAC
AGTGAAAGTCAAGATAATCGCCTTGTGTTAGACAAATTACTGGGCTTGTTGCAAACAGGTCATTATGTGAAACGTATGAT
CCATTTAACTTTTTTAACGTTGAGTAATTAA

Upstream 100 bases:

>100_bases
TAATCGAAAAAGTTCAGTATTTATTGGATAATGCCCGCGTAAAATCACATTACTGTTTTTTCCGTTTTATATAATTTATT
GAAATAAAAGGAATTTTATT

Downstream 100 bases:

>100_bases
TTTATGGCTAAGGCACCTAAAACAGCATATGTGTGTAATGATTGTGGCGCAGAGTTTTCTCGTTGGCAGGGACAATGTGC
GGCATGTAAAGCTTGGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MGNEVELKLAVTPKFADLLHQELTNFRILAHNTIFLANTYYDTADRVLAKHKMGLRVRQENQQYTLTLKTDGEVHGGLHI
RPEYNVTLPDAQPNISLLVEKYALTLPNYAQWELKPVFSTDFERESWLIECGNGTHIEVAFDQGKIVAGEKQTPICEVEF
ELKSGLPIDLLRFVQTLTLENEIRLSSASKAKRGYLLANPTSMTVTNWLEKWREFLQFTQNMTSALAKLRALFRLEQDLI
EETFAIGADYFAADFLRTVERIGAFFNLYHYYVEQATLLDSALNQQVGEENLACEQTYLLDLLDSHHSLLQQVRELIRLH
SESQDNRLVLDKLLGLLQTGHYVKRMIHLTFLTLSN

Sequences:

>Translated_356_residues
MGNEVELKLAVTPKFADLLHQELTNFRILAHNTIFLANTYYDTADRVLAKHKMGLRVRQENQQYTLTLKTDGEVHGGLHI
RPEYNVTLPDAQPNISLLVEKYALTLPNYAQWELKPVFSTDFERESWLIECGNGTHIEVAFDQGKIVAGEKQTPICEVEF
ELKSGLPIDLLRFVQTLTLENEIRLSSASKAKRGYLLANPTSMTVTNWLEKWREFLQFTQNMTSALAKLRALFRLEQDLI
EETFAIGADYFAADFLRTVERIGAFFNLYHYYVEQATLLDSALNQQVGEENLACEQTYLLDLLDSHHSLLQQVRELIRLH
SESQDNRLVLDKLLGLLQTGHYVKRMIHLTFLTLSN
>Mature_355_residues
GNEVELKLAVTPKFADLLHQELTNFRILAHNTIFLANTYYDTADRVLAKHKMGLRVRQENQQYTLTLKTDGEVHGGLHIR
PEYNVTLPDAQPNISLLVEKYALTLPNYAQWELKPVFSTDFERESWLIECGNGTHIEVAFDQGKIVAGEKQTPICEVEFE
LKSGLPIDLLRFVQTLTLENEIRLSSASKAKRGYLLANPTSMTVTNWLEKWREFLQFTQNMTSALAKLRALFRLEQDLIE
ETFAIGADYFAADFLRTVERIGAFFNLYHYYVEQATLLDSALNQQVGEENLACEQTYLLDLLDSHHSLLQQVRELIRLHS
ESQDNRLVLDKLLGLLQTGHYVKRMIHLTFLTLSN

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiF [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=205, Percent_Identity=41.9512195121951, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 40935; Mature: 40804

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNEVELKLAVTPKFADLLHQELTNFRILAHNTIFLANTYYDTADRVLAKHKMGLRVRQE
CCCEEEEEEEECCHHHHHHHHHHHCEEEEEECEEEEEECCCCHHHHHHHHHHCCCEEEEC
NQQYTLTLKTDGEVHGGLHIRPEYNVTLPDAQPNISLLVEKYALTLPNYAQWELKPVFST
CCEEEEEEEECCCCCCCEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCC
DFERESWLIECGNGTHIEVAFDQGKIVAGEKQTPICEVEFELKSGLPIDLLRFVQTLTLE
CCCCCCEEEECCCCCEEEEEECCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHCC
NEIRLSSASKAKRGYLLANPTSMTVTNWLEKWREFLQFTQNMTSALAKLRALFRLEQDLI
CHHEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EETFAIGADYFAADFLRTVERIGAFFNLYHYYVEQATLLDSALNQQVGEENLACEQTYLL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
DLLDSHHSLLQQVRELIRLHSESQDNRLVLDKLLGLLQTGHYVKRMIHLTFLTLSN
HHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHEEEECC
>Mature Secondary Structure 
GNEVELKLAVTPKFADLLHQELTNFRILAHNTIFLANTYYDTADRVLAKHKMGLRVRQE
CCEEEEEEEECCHHHHHHHHHHHCEEEEEECEEEEEECCCCHHHHHHHHHHCCCEEEEC
NQQYTLTLKTDGEVHGGLHIRPEYNVTLPDAQPNISLLVEKYALTLPNYAQWELKPVFST
CCEEEEEEEECCCCCCCEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCC
DFERESWLIECGNGTHIEVAFDQGKIVAGEKQTPICEVEFELKSGLPIDLLRFVQTLTLE
CCCCCCEEEECCCCCEEEEEECCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHCC
NEIRLSSASKAKRGYLLANPTSMTVTNWLEKWREFLQFTQNMTSALAKLRALFRLEQDLI
CHHEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EETFAIGADYFAADFLRTVERIGAFFNLYHYYVEQATLLDSALNQQVGEENLACEQTYLL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
DLLDSHHSLLQQVRELIRLHSESQDNRLVLDKLLGLLQTGHYVKRMIHLTFLTLSN
HHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]