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The map label for this gene is yebA [C]

Identifier: 15602108

GI number: 15602108

Start: 273462

End: 275057

Strand: Direct

Name: yebA [C]

Synonym: PM0243

Alternate gene names: 15602108

Gene position: 273462-275057 (Clockwise)

Preceding gene: 15602105

Following gene: 15602116

Centisome position: 12.11

GC content: 40.98

Gene sequence:

>1596_bases
GTGCGGCACGTTAAATTAGCAAGAGATAGACGAAGAAGAAAATTGCAGATTAAGATCGCAATTTTTTTTAGCATTATTTT
ATTCATCGTTCTCGTTGTATCGTTGGGAAAAAAAGAAGAAGGGCAAGATTCAAGTGCAGATAGCCAAACACAAACAGAAA
CTCAAATTGAAAAGCAACCTGCCTTATCTACAGCCACGGTAGAATCGCCTTCTTCGGTACAAGCGGATAGCACCCTCTCT
CCTCCCCCATCCGAGGAATCAGTAGAAAAGCAAGCGATAACAGAACATCATACTGAGTCTTCTGCTGTCAGTATGGATGA
AAAAAACAGTGACACTCAAGTAGATGCATCGTCACAAGAAACGACAGCAAAACCCGCAGAAAATACACTAGATGCAACGT
CTTTTTATGATGATTTAGAAGCAAAAGATGATGAGGTTGATGAAATCAAACCTGATATGCTAGATGAATTGGCAGCCTTT
CCTGAACCTGTTCGTCATGCGCTGAGTGATTTGTTTGATGTTATGGATCAGGCAATGCGGATTAAAAATCAGTTCAGCCA
CACGGTGGTAAAAGGGGATTCCTTAAAAGATGTTTTAGAGTTGTCTGGCTTAGATGCCAGTGTAAGCGAGCGCTTAATTA
AAGCCTATCCTGAATTTAAAAACTTAAAGCCGGGTCAGCAATTTTATTGGATCTTAGATAACCAAGGCGAACTTGAATAC
CTTAATTGGTTGGTTTCAGAGAGAGAAGAAAAAATCTACGAAAAAACAGCAGATGGTCAATATCAGCGTGAAATTTTAAA
GAAACAAAGTGTTTGGAAAAAAGAGGTGTTAAAAGGCAGAATTGACGGTTCTTTTAATACCGCATTAAGAACATTAGGTT
TAGATATCCGCCAAATTAATCAACTTGCGAATGCATTACAATGGCAAATTAATTTAAAACGGCTAAAAAAAGGCGATAAA
TTTGCGGTATTAGTGACACGTGAATATATTGAAGGGAAGCTGACGGGGCAAGGTAATGTGGATGGAATCCATATTATTTC
AGCTGGCAAAAGTTATTATGCGATTCAAGCGAGTAATGGGCGTTATTATAATCGCCAAGGCGAAACGCTAGGCAAAGGTT
TTGCTCGTTATCCTTTACAACGTCAGGCTCGCGTTTCTTCTCATTTTAATCCCTATCGACGCCACCCAGTGACTGGGCGT
ATTGCACCACATAAAGGCGTGGATTTTGCTATGCCCGTTGGTACACCGGTCATTGCACCGGCGGATGGTATTGTGGAAAA
AGTCGCGTATCAAGCAAATGGCGCAGGACGTTATATTGTGGTACGACATGGGCGTGAATATCAAACCGTTTATATGCACT
TAAGCCGTGCTCTAGTCAAAGCAGGGCAAAATGTTAAACGTGGTCAACGTATTGCTCTTTCGGGAAATACAGGGCGTTCG
ACAGGACCGCATTTACATTATGAATTTCATATTAATGGTCGCGCGGTTAATCCATTGACTGTGAAATTACCGGGAACAAG
TAGTGGTATGGGAACTGCTGAACGTAAACAATTCTTAGTGAAAGCGAAAGAAATTGAGCGGCAGCTCAGACTATAA

Upstream 100 bases:

>100_bases
TACAATTTGGGCATTCATATGCCTTTTTTAACATTCCGTTGAATTTTTTATTGTTTGCTTGGTCATAATTAAACGAATTG
AGAAACAAAGGAATAGAAGC

Downstream 100 bases:

>100_bases
AAGACGACGCTTATCGAGATAAAAAAGTGCGGTTAAAAATTCAATATTTTTAACCGCACTTTTTTTGTCATTTGACTAGG
TGAACATTGCAGAAATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MRHVKLARDRRRRKLQIKIAIFFSIILFIVLVVSLGKKEEGQDSSADSQTQTETQIEKQPALSTATVESPSSVQADSTLS
PPPSEESVEKQAITEHHTESSAVSMDEKNSDTQVDASSQETTAKPAENTLDATSFYDDLEAKDDEVDEIKPDMLDELAAF
PEPVRHALSDLFDVMDQAMRIKNQFSHTVVKGDSLKDVLELSGLDASVSERLIKAYPEFKNLKPGQQFYWILDNQGELEY
LNWLVSEREEKIYEKTADGQYQREILKKQSVWKKEVLKGRIDGSFNTALRTLGLDIRQINQLANALQWQINLKRLKKGDK
FAVLVTREYIEGKLTGQGNVDGIHIISAGKSYYAIQASNGRYYNRQGETLGKGFARYPLQRQARVSSHFNPYRRHPVTGR
IAPHKGVDFAMPVGTPVIAPADGIVEKVAYQANGAGRYIVVRHGREYQTVYMHLSRALVKAGQNVKRGQRIALSGNTGRS
TGPHLHYEFHINGRAVNPLTVKLPGTSSGMGTAERKQFLVKAKEIERQLRL

Sequences:

>Translated_531_residues
MRHVKLARDRRRRKLQIKIAIFFSIILFIVLVVSLGKKEEGQDSSADSQTQTETQIEKQPALSTATVESPSSVQADSTLS
PPPSEESVEKQAITEHHTESSAVSMDEKNSDTQVDASSQETTAKPAENTLDATSFYDDLEAKDDEVDEIKPDMLDELAAF
PEPVRHALSDLFDVMDQAMRIKNQFSHTVVKGDSLKDVLELSGLDASVSERLIKAYPEFKNLKPGQQFYWILDNQGELEY
LNWLVSEREEKIYEKTADGQYQREILKKQSVWKKEVLKGRIDGSFNTALRTLGLDIRQINQLANALQWQINLKRLKKGDK
FAVLVTREYIEGKLTGQGNVDGIHIISAGKSYYAIQASNGRYYNRQGETLGKGFARYPLQRQARVSSHFNPYRRHPVTGR
IAPHKGVDFAMPVGTPVIAPADGIVEKVAYQANGAGRYIVVRHGREYQTVYMHLSRALVKAGQNVKRGQRIALSGNTGRS
TGPHLHYEFHINGRAVNPLTVKLPGTSSGMGTAERKQFLVKAKEIERQLRL
>Mature_531_residues
MRHVKLARDRRRRKLQIKIAIFFSIILFIVLVVSLGKKEEGQDSSADSQTQTETQIEKQPALSTATVESPSSVQADSTLS
PPPSEESVEKQAITEHHTESSAVSMDEKNSDTQVDASSQETTAKPAENTLDATSFYDDLEAKDDEVDEIKPDMLDELAAF
PEPVRHALSDLFDVMDQAMRIKNQFSHTVVKGDSLKDVLELSGLDASVSERLIKAYPEFKNLKPGQQFYWILDNQGELEY
LNWLVSEREEKIYEKTADGQYQREILKKQSVWKKEVLKGRIDGSFNTALRTLGLDIRQINQLANALQWQINLKRLKKGDK
FAVLVTREYIEGKLTGQGNVDGIHIISAGKSYYAIQASNGRYYNRQGETLGKGFARYPLQRQARVSSHFNPYRRHPVTGR
IAPHKGVDFAMPVGTPVIAPADGIVEKVAYQANGAGRYIVVRHGREYQTVYMHLSRALVKAGQNVKRGQRIALSGNTGRS
TGPHLHYEFHINGRAVNPLTVKLPGTSSGMGTAERKQFLVKAKEIERQLRL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=404, Percent_Identity=46.039603960396, Blast_Score=351, Evalue=8e-98,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=41.4141414141414, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87082174, Length=112, Percent_Identity=37.5, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 59591; Mature: 59591

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHVKLARDRRRRKLQIKIAIFFSIILFIVLVVSLGKKEEGQDSSADSQTQTETQIEKQP
CCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
ALSTATVESPSSVQADSTLSPPPSEESVEKQAITEHHTESSAVSMDEKNSDTQVDASSQE
CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHEECCCCCCCCEECCCCCC
TTAKPAENTLDATSFYDDLEAKDDEVDEIKPDMLDELAAFPEPVRHALSDLFDVMDQAMR
CCCCCCCCCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IKNQFSHTVVKGDSLKDVLELSGLDASVSERLIKAYPEFKNLKPGQQFYWILDNQGELEY
HHHHHHHHEECCCCHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCEEEEEECCCCCHHH
LNWLVSEREEKIYEKTADGQYQREILKKQSVWKKEVLKGRIDGSFNTALRTLGLDIRQIN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH
QLANALQWQINLKRLKKGDKFAVLVTREYIEGKLTGQGNVDGIHIISAGKSYYAIQASNG
HHHHHHHHHEEHHHHCCCCCEEEEEEEHHHCEEECCCCCCCEEEEEECCCEEEEEECCCC
RYYNRQGETLGKGFARYPLQRQARVSSHFNPYRRHPVTGRIAPHKGVDFAMPVGTPVIAP
EEECCCCCHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCC
ADGIVEKVAYQANGAGRYIVVRHGREYQTVYMHLSRALVKAGQNVKRGQRIALSGNTGRS
CHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
TGPHLHYEFHINGRAVNPLTVKLPGTSSGMGTAERKQFLVKAKEIERQLRL
CCCEEEEEEEECCEEECEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRHVKLARDRRRRKLQIKIAIFFSIILFIVLVVSLGKKEEGQDSSADSQTQTETQIEKQP
CCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
ALSTATVESPSSVQADSTLSPPPSEESVEKQAITEHHTESSAVSMDEKNSDTQVDASSQE
CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHEECCCCCCCCEECCCCCC
TTAKPAENTLDATSFYDDLEAKDDEVDEIKPDMLDELAAFPEPVRHALSDLFDVMDQAMR
CCCCCCCCCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IKNQFSHTVVKGDSLKDVLELSGLDASVSERLIKAYPEFKNLKPGQQFYWILDNQGELEY
HHHHHHHHEECCCCHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCEEEEEECCCCCHHH
LNWLVSEREEKIYEKTADGQYQREILKKQSVWKKEVLKGRIDGSFNTALRTLGLDIRQIN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH
QLANALQWQINLKRLKKGDKFAVLVTREYIEGKLTGQGNVDGIHIISAGKSYYAIQASNG
HHHHHHHHHEEHHHHCCCCCEEEEEEEHHHCEEECCCCCCCEEEEEECCCEEEEEECCCC
RYYNRQGETLGKGFARYPLQRQARVSSHFNPYRRHPVTGRIAPHKGVDFAMPVGTPVIAP
EEECCCCCHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCC
ADGIVEKVAYQANGAGRYIVVRHGREYQTVYMHLSRALVKAGQNVKRGQRIALSGNTGRS
CHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
TGPHLHYEFHINGRAVNPLTVKLPGTSSGMGTAERKQFLVKAKEIERQLRL
CCCEEEEEEEECCEEECEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]