| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is est [H]
Identifier: 15601941
GI number: 15601941
Start: 102920
End: 104959
Strand: Direct
Name: est [H]
Synonym: PM0076
Alternate gene names: 15601941
Gene position: 102920-104959 (Clockwise)
Preceding gene: 15601940
Following gene: 15601942
Centisome position: 4.56
GC content: 42.25
Gene sequence:
>2040_bases GTGAAAATTAATACACTTTCATTCGCATTATTTTGTTCACTAAGTTCGGCTGCTCTGGCAAAAGATGTTGTCGTGTTTGG TGATAGTTTAAGTGATATGGGGCAAACAGGTTGGAATAAGAAAGCCTCTTATTTAAAGGCTGATGGAAGCTATCATCACC TTTATGATGAATATTTGGCTCAAGCATTTGGGAAAAAATTAATACCTTCTACACAAGGTGGTTTGAACTACGCGTACAGC GGTGGGGTGATTGTTGGTGCACATAATACTAGAACAGCAGAACAACCTCATTTAGCGCTAGAAAAGCAGATCAACGAGTA TTTACATGCGCCAGTCAAAAAAGAAGCTTTACATATTCTATGGGCAGGCGGTAATGATTTGGCGACAGTATTAGCAACAG CAGTAACGAAGACAACACCTGAAGAGAAACAAGCCTACGTGTTAGCCAGTATTAACACCATGGCACAAACGATGGCACAG CAATGGGGAGCATTACAACAGGCCGGTGTTAATCAGATCATCGCGCCTACGATCCCAAACGTGACTTATACGCCTGAATT TTTCGATAAATTGGGTGAAGCAGCCGGCGCACAAATCCAAGCAAAATCCTATGGTTTAATCAAACAATCGGATTTTGTTG CCAATTTTAAAGCGGCGGCTGAACAACTTTTAGTCCAACCAACCAAGAATTTGGAAGAATTTGAAAAACACCGTGTACAA ACATTAGAAAAAGCAGCAGAAGATTTTTATAACAGTCGATATTGGTTCACTCAAATTGCATTGTCCAGTGCGGGTTATAA TGCCAAAGGTATTGCGGAGACATTAATTAAAGAATACAAAACCATTGTTGAACAGGCGGCACAAGCCACCGCATTCTTAA ATGCCAGTATTACGTCAGCGTTAAACCAAGTGGGTGGAAATATTGTACGTATTGACACTGATGGATTATTAAAAGATATG ATGACCCGTCCAGCAGAATATGGTTTAACGAATACGACAACCGTCGTTTGTAAAGAGAGCACAGCAGACCCAGCTAAACC GGCATGTAAGCCAGAGGATCAAACAGCTGCCAGTCAACGCTTATTTGCAGACAGTTTCCACCCAGGACCAACTGCACATA AAGCGATGTCAGATTATATTCTTAATGTATTACAGACGCCAAAGGACATGGGGATTCTGACTCAGATCGTTCAGCAGCAA ACGGAGCTGGCATTGGATTTTATTCGTACTGAAAGTAATCGTCATCGTTTACAGCAACAAAGCGCACAGAGTGTTGATAC ATTAGCCGCTTATCAGAAACAAAAAGGGGGGCATAGTTTACATGTTGGTGCTAAAGTCCAATTTAACCCTCAGTGGCAAT TAGCGCTTGTTGCGAGTCAGCAGAAACAAGATGTGCAACAGGGGCTGATTAATATCAATACGCAAAATCGCGTATTAAGC ACCGCACTTCGTTATGATGCCGATAATTGGTGGTTGGGAAGTGTACTCCAAGTGAATAATACAACATTGACAACAGATAG AGTGGCGTATATTGGACATTCGGCTCACCAACAATCAGCCGAAACCGAGGCTGAAAGTTTCAGCATGGGGTTATTTGCCG GCTATGAATGGAAATTCAAGGCGTTAGGTATTGCTTTGATTGCGGATCTCAATAAAACCAAAACGGATGTGGCTGGATTT GGTGAGCAAAACCGTGGCATCACACAAATGCAATTTGCCGCACGTACTGAAAAAAGTGTAAGAAGTGGTGTTGGCTTTGA TTTACGTTATCAGGCGGCAAGCTGGCAACCTTATGTCACGACACGTTGGGTAAAAGAATGGAACAATGATTTACCTACCA TCCAAGCGAGTTTGAATGGGAGTTCTTTTATGACTGTCTTGCCATCGCAAGATAACCAGTGGGTAAATATTGTTGCGGGT TTACACTTTAAACCGATAAGCAGTGGGTTCCATGCAAATCTTGCTTTTCGTCGTGATCTAGGACGTAAAAATGCGCTTTC AAACACGACACTCCAAGCGGGCATTGGTTTTACCTTCTAA
Upstream 100 bases:
>100_bases TTCTGTTCATACCAGTAGTGGTCTGGCTAGGTATCTTCCTATAATCAACGTATGATGACGCAAATTTTTGACTGACGATG AATAATTGAAGGACATTATT
Downstream 100 bases:
>100_bases AAAAAGCCAGCACACTTTTCTGCAGTCCGTATCTCACTCGGCATTTATTTAAGCGAATGCCGAGTATTTTTTTGTTGTGA GGACAATGTAATATAGTCGA
Product: Est
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MKINTLSFALFCSLSSAALAKDVVVFGDSLSDMGQTGWNKKASYLKADGSYHHLYDEYLAQAFGKKLIPSTQGGLNYAYS GGVIVGAHNTRTAEQPHLALEKQINEYLHAPVKKEALHILWAGGNDLATVLATAVTKTTPEEKQAYVLASINTMAQTMAQ QWGALQQAGVNQIIAPTIPNVTYTPEFFDKLGEAAGAQIQAKSYGLIKQSDFVANFKAAAEQLLVQPTKNLEEFEKHRVQ TLEKAAEDFYNSRYWFTQIALSSAGYNAKGIAETLIKEYKTIVEQAAQATAFLNASITSALNQVGGNIVRIDTDGLLKDM MTRPAEYGLTNTTTVVCKESTADPAKPACKPEDQTAASQRLFADSFHPGPTAHKAMSDYILNVLQTPKDMGILTQIVQQQ TELALDFIRTESNRHRLQQQSAQSVDTLAAYQKQKGGHSLHVGAKVQFNPQWQLALVASQQKQDVQQGLININTQNRVLS TALRYDADNWWLGSVLQVNNTTLTTDRVAYIGHSAHQQSAETEAESFSMGLFAGYEWKFKALGIALIADLNKTKTDVAGF GEQNRGITQMQFAARTEKSVRSGVGFDLRYQAASWQPYVTTRWVKEWNNDLPTIQASLNGSSFMTVLPSQDNQWVNIVAG LHFKPISSGFHANLAFRRDLGRKNALSNTTLQAGIGFTF
Sequences:
>Translated_679_residues MKINTLSFALFCSLSSAALAKDVVVFGDSLSDMGQTGWNKKASYLKADGSYHHLYDEYLAQAFGKKLIPSTQGGLNYAYS GGVIVGAHNTRTAEQPHLALEKQINEYLHAPVKKEALHILWAGGNDLATVLATAVTKTTPEEKQAYVLASINTMAQTMAQ QWGALQQAGVNQIIAPTIPNVTYTPEFFDKLGEAAGAQIQAKSYGLIKQSDFVANFKAAAEQLLVQPTKNLEEFEKHRVQ TLEKAAEDFYNSRYWFTQIALSSAGYNAKGIAETLIKEYKTIVEQAAQATAFLNASITSALNQVGGNIVRIDTDGLLKDM MTRPAEYGLTNTTTVVCKESTADPAKPACKPEDQTAASQRLFADSFHPGPTAHKAMSDYILNVLQTPKDMGILTQIVQQQ TELALDFIRTESNRHRLQQQSAQSVDTLAAYQKQKGGHSLHVGAKVQFNPQWQLALVASQQKQDVQQGLININTQNRVLS TALRYDADNWWLGSVLQVNNTTLTTDRVAYIGHSAHQQSAETEAESFSMGLFAGYEWKFKALGIALIADLNKTKTDVAGF GEQNRGITQMQFAARTEKSVRSGVGFDLRYQAASWQPYVTTRWVKEWNNDLPTIQASLNGSSFMTVLPSQDNQWVNIVAG LHFKPISSGFHANLAFRRDLGRKNALSNTTLQAGIGFTF >Mature_679_residues MKINTLSFALFCSLSSAALAKDVVVFGDSLSDMGQTGWNKKASYLKADGSYHHLYDEYLAQAFGKKLIPSTQGGLNYAYS GGVIVGAHNTRTAEQPHLALEKQINEYLHAPVKKEALHILWAGGNDLATVLATAVTKTTPEEKQAYVLASINTMAQTMAQ QWGALQQAGVNQIIAPTIPNVTYTPEFFDKLGEAAGAQIQAKSYGLIKQSDFVANFKAAAEQLLVQPTKNLEEFEKHRVQ TLEKAAEDFYNSRYWFTQIALSSAGYNAKGIAETLIKEYKTIVEQAAQATAFLNASITSALNQVGGNIVRIDTDGLLKDM MTRPAEYGLTNTTTVVCKESTADPAKPACKPEDQTAASQRLFADSFHPGPTAHKAMSDYILNVLQTPKDMGILTQIVQQQ TELALDFIRTESNRHRLQQQSAQSVDTLAAYQKQKGGHSLHVGAKVQFNPQWQLALVASQQKQDVQQGLININTQNRVLS TALRYDADNWWLGSVLQVNNTTLTTDRVAYIGHSAHQQSAETEAESFSMGLFAGYEWKFKALGIALIADLNKTKTDVAGF GEQNRGITQMQFAARTEKSVRSGVGFDLRYQAASWQPYVTTRWVKEWNNDLPTIQASLNGSSFMTVLPSQDNQWVNIVAG LHFKPISSGFHANLAFRRDLGRKNALSNTTLQAGIGFTF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 74602; Mature: 74602
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINTLSFALFCSLSSAALAKDVVVFGDSLSDMGQTGWNKKASYLKADGSYHHLYDEYLA CCCCCEEHHHHHHHHHHHHHHHHEEECCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHHH QAFGKKLIPSTQGGLNYAYSGGVIVGAHNTRTAEQPHLALEKQINEYLHAPVKKEALHIL HHHCHHCCCCCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE WAGGNDLATVLATAVTKTTPEEKQAYVLASINTMAQTMAQQWGALQQAGVNQIIAPTIPN EECCCHHHHHHHHHHHCCCCCHHCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC VTYTPEFFDKLGEAAGAQIQAKSYGLIKQSDFVANFKAAAEQLLVQPTKNLEEFEKHRVQ CEECHHHHHHHHHHCCCEEEECCCCCEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TLEKAAEDFYNSRYWFTQIALSSAGYNAKGIAETLIKEYKTIVEQAAQATAFLNASITSA HHHHHHHHHHCCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNQVGGNIVRIDTDGLLKDMMTRPAEYGLTNTTTVVCKESTADPAKPACKPEDQTAASQR HHHHCCCEEEEECHHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH LFADSFHPGPTAHKAMSDYILNVLQTPKDMGILTQIVQQQTELALDFIRTESNRHRLQQQ HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SAQSVDTLAAYQKQKGGHSLHVGAKVQFNPQWQLALVASQQKQDVQQGLININTQNRVLS HHHHHHHHHHHHHHCCCCEEEECEEEEECCCEEEEEECHHHHHHHHHHHEECCCHHHHHH TALRYDADNWWLGSVLQVNNTTLTTDRVAYIGHSAHQQSAETEAESFSMGLFAGYEWKFK HHHHCCCCCCEECCEEEECCCEEECCHHHHHCCHHHHHHHHHHHHHHCCCEEECCCEEHH ALGIALIADLNKTKTDVAGFGEQNRGITQMQFAARTEKSVRSGVGFDLRYQAASWQPYVT HHHEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH TRWVKEWNNDLPTIQASLNGSSFMTVLPSQDNQWVNIVAGLHFKPISSGFHANLAFRRDL HHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCEEEECCCCCCCCHHHHHHC GRKNALSNTTLQAGIGFTF CCCCCCCCCEEECCCCCCC >Mature Secondary Structure MKINTLSFALFCSLSSAALAKDVVVFGDSLSDMGQTGWNKKASYLKADGSYHHLYDEYLA CCCCCEEHHHHHHHHHHHHHHHHEEECCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHHH QAFGKKLIPSTQGGLNYAYSGGVIVGAHNTRTAEQPHLALEKQINEYLHAPVKKEALHIL HHHCHHCCCCCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE WAGGNDLATVLATAVTKTTPEEKQAYVLASINTMAQTMAQQWGALQQAGVNQIIAPTIPN EECCCHHHHHHHHHHHCCCCCHHCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC VTYTPEFFDKLGEAAGAQIQAKSYGLIKQSDFVANFKAAAEQLLVQPTKNLEEFEKHRVQ CEECHHHHHHHHHHCCCEEEECCCCCEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TLEKAAEDFYNSRYWFTQIALSSAGYNAKGIAETLIKEYKTIVEQAAQATAFLNASITSA HHHHHHHHHHCCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNQVGGNIVRIDTDGLLKDMMTRPAEYGLTNTTTVVCKESTADPAKPACKPEDQTAASQR HHHHCCCEEEEECHHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH LFADSFHPGPTAHKAMSDYILNVLQTPKDMGILTQIVQQQTELALDFIRTESNRHRLQQQ HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SAQSVDTLAAYQKQKGGHSLHVGAKVQFNPQWQLALVASQQKQDVQQGLININTQNRVLS HHHHHHHHHHHHHHCCCCEEEECEEEEECCCEEEEEECHHHHHHHHHHHEECCCHHHHHH TALRYDADNWWLGSVLQVNNTTLTTDRVAYIGHSAHQQSAETEAESFSMGLFAGYEWKFK HHHHCCCCCCEECCEEEECCCEEECCHHHHHCCHHHHHHHHHHHHHHCCCEEECCCEEHH ALGIALIADLNKTKTDVAGFGEQNRGITQMQFAARTEKSVRSGVGFDLRYQAASWQPYVT HHHEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH TRWVKEWNNDLPTIQASLNGSSFMTVLPSQDNQWVNIVAGLHFKPISSGFHANLAFRRDL HHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCEEEECCCCCCCCHHHHHHC GRKNALSNTTLQAGIGFTF CCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8449874 [H]