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The map label for this gene is lysK [H]

Identifier: 15595004

GI number: 15595004

Start: 698400

End: 699965

Strand: Reverse

Name: lysK [H]

Synonym: BB0659

Alternate gene names: 15595004

Gene position: 699965-698400 (Counterclockwise)

Preceding gene: 15595005

Following gene: 15595002

Centisome position: 76.86

GC content: 31.67

Gene sequence:

>1566_bases
GTGAAAACAGCACACTGGGCAGATTTTTACGCAGAAAAAATAAAAAAAGAAAAAGGTCCAAAAAACTTATACACAGTAGC
ATCGGGAATTACTCCATCTGGAACTGTGCACATTGGCAATTTTAGAGAAGTTATTTCGGTAGACCTTGTAGCAAGAGCAC
TAAGAGACTCTGGATCAAAAGTAAGGTTTATTTATTCTTGGGATAATTACGACGTATTTCGAAAAGTTCCCAAAAATATG
CCAGAACAAGAACTTCTTACAACTTATTTAAGACAAGCAATAACAAGGGTCCCTGACACAAGAAGCCACAAAACAAGTTA
TGCAAGGGCTAATGAAATTGAATTTGAAAAATATCTGCCTGTAGTTGGGATCAATCCTGAATTCATCGACCAAAGCAAAC
AATATACCAGCAACGCTTATGCAAGCCAAATAAAATTTGCACTTGATCATAAAAAAGAACTGTCTGAAGCATTAAACGAA
TACAGAACCTCAAAGCTTGAAGAAAATTGGTATCCAATCAGTGTATTTTGTACAAAATGCAATAGAGACACAACAACTGT
AAATAATTATGACAATCATTACTCTGTTGAGTATTCATGTGAATGTGGAAATCAAGAATCTCTAGACATAAGAACCACAT
GGGCCATTAAACTTCCTTGGAGAATAGATTGGCCTATGAGATGGAAATATGAAAAAGTTGACTTTGAGCCTGCAGGAAAA
GACCACCACAGCAGTGGCGGCAGTTTTGATACATCTAAAAATATTGTAAAAATTTTTCAAGGTAGCCCTCCTGTAACATT
TCAATATGACTTTATTTCAATAAAAGGACGTGGTGGAAAAATATCCTCCTCATCGGGAGATGTCATATCGCTCAAAGATG
TTCTTGAGGTCTATACACCCGAAGTCACAAGGTTTTTATTTGCTGCTACTAAACCAAATACTGAATTTTCAATCTCATTT
GATCTTGATGTAATTAAAATATACGAAGATTACGACAAATTTGAGAGAATCTACTATGGAGTAGAAGATGTAAAAGAAGA
AAAAAAAAGAGCATTTAAAAGAATTTACGAACTATCTCAACCATACATGCCAAGCAAAAGAATCCCTTATCAGGTCGGAT
TCAGACATTTAAGTGTAATCAGTCAAATATTTGAAAATAATATAAATAAAATTTTAAATTACTTGAAAAACGTTCAAGAA
GATCAAAAAGACAAACTAATAAATAAAATAAATTGCGCAATTAATTGGATAAGAGATTTTGCACCCGAAGATTTCAAATT
TTCATTAAGATCTAAATTTGATAATATGGAAATACTAGAAGAAAATAGCAAAAAAGCAATTAATGAACTTTTGGATTTTT
TAAAGAAAAATTTTGAAGTTGCCACAGAACAAGACATTCAAAACGAAATATATAAAATTTCAAGAGAAAATAATATAGAA
CCTGCTTTATTTTTTAAACAAATTTATAAAATTTTAATTGACAAAGAAAAAGGGCCCAAATTAGCTGGATTTATCAAAAT
AATTGGTATTGATCGCTTTGAAAAGATTACAAGCAAATACGTTTAA

Upstream 100 bases:

>100_bases
GACTTATAAATTAACAAACATTAAACTGCATTTTTTTAAATTCTTGAAACTTGAAAAACAAAATGCTAAAATTTACCTAA
ATTTAAATTAGGAATAAAAT

Downstream 100 bases:

>100_bases
GCCTTAAAATTAATAAAAAATAAGTCATAATTATATGACTTATTTACACTTTAATACAAATAAATCGTTACTTTAACTTT
CCTTGACTAGCAACAGATTC

Product: lysyl-tRNA synthetase

Products: NA

Alternate protein names: Lysine--tRNA ligase; LysRS [H]

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MKTAHWADFYAEKIKKEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDVFRKVPKNM
PEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQYTSNAYASQIKFALDHKKELSEALNE
YRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHYSVEYSCECGNQESLDIRTTWAIKLPWRIDWPMRWKYEKVDFEPAGK
DHHSSGGSFDTSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAATKPNTEFSISF
DLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQPYMPSKRIPYQVGFRHLSVISQIFENNINKILNYLKNVQE
DQKDKLINKINCAINWIRDFAPEDFKFSLRSKFDNMEILEENSKKAINELLDFLKKNFEVATEQDIQNEIYKISRENNIE
PALFFKQIYKILIDKEKGPKLAGFIKIIGIDRFEKITSKYV

Sequences:

>Translated_521_residues
MKTAHWADFYAEKIKKEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDVFRKVPKNM
PEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQYTSNAYASQIKFALDHKKELSEALNE
YRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHYSVEYSCECGNQESLDIRTTWAIKLPWRIDWPMRWKYEKVDFEPAGK
DHHSSGGSFDTSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAATKPNTEFSISF
DLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQPYMPSKRIPYQVGFRHLSVISQIFENNINKILNYLKNVQE
DQKDKLINKINCAINWIRDFAPEDFKFSLRSKFDNMEILEENSKKAINELLDFLKKNFEVATEQDIQNEIYKISRENNIE
PALFFKQIYKILIDKEKGPKLAGFIKIIGIDRFEKITSKYV
>Mature_521_residues
MKTAHWADFYAEKIKKEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDVFRKVPKNM
PEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQYTSNAYASQIKFALDHKKELSEALNE
YRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHYSVEYSCECGNQESLDIRTTWAIKLPWRIDWPMRWKYEKVDFEPAGK
DHHSSGGSFDTSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAATKPNTEFSISF
DLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQPYMPSKRIPYQVGFRHLSVISQIFENNINKILNYLKNVQE
DQKDKLINKINCAINWIRDFAPEDFKFSLRSKFDNMEILEENSKKAINELLDFLKKNFEVATEQDIQNEIYKISRENNIE
PALFFKQIYKILIDKEKGPKLAGFIKIIGIDRFEKITSKYV

Specific function: Unknown

COG id: COG1384

COG function: function code J; Lysyl-tRNA synthetase (class I)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008925
- InterPro:   IPR020751
- InterPro:   IPR001412
- InterPro:   IPR002904
- InterPro:   IPR020754
- InterPro:   IPR020756
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01921 tRNA-synt_1f [H]

EC number: =6.1.1.6 [H]

Molecular weight: Translated: 60939; Mature: 60939

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAHWADFYAEKIKKEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSK
CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCE
VRFIYSWDNYDVFRKVPKNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLP
EEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHCCC
VVGINPEFIDQSKQYTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKC
EEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
NRDTTTVNNYDNHYSVEYSCECGNQESLDIRTTWAIKLPWRIDWPMRWKYEKVDFEPAGK
CCCCCEECCCCCEEEEEEEECCCCCCCEEEEEEEEEEECEEECCCCCEEEEEECCCCCCC
DHHSSGGSFDTSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTP
CCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHCC
EVTRFLFAATKPNTEFSISFDLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQ
HHHHHHHEECCCCCEEEEEECCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
PYMPSKRIPYQVGFRHLSVISQIFENNINKILNYLKNVQEDQKDKLINKINCAINWIRDF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APEDFKFSLRSKFDNMEILEENSKKAINELLDFLKKNFEVATEQDIQNEIYKISRENNIE
CCCCCEEHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PALFFKQIYKILIDKEKGPKLAGFIKIIGIDRFEKITSKYV
HHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHCCC
>Mature Secondary Structure
MKTAHWADFYAEKIKKEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSK
CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCE
VRFIYSWDNYDVFRKVPKNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLP
EEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHCCC
VVGINPEFIDQSKQYTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKC
EEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
NRDTTTVNNYDNHYSVEYSCECGNQESLDIRTTWAIKLPWRIDWPMRWKYEKVDFEPAGK
CCCCCEECCCCCEEEEEEEECCCCCCCEEEEEEEEEEECEEECCCCCEEEEEECCCCCCC
DHHSSGGSFDTSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTP
CCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHCC
EVTRFLFAATKPNTEFSISFDLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQ
HHHHHHHEECCCCCEEEEEECCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
PYMPSKRIPYQVGFRHLSVISQIFENNINKILNYLKNVQEDQKDKLINKINCAINWIRDF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APEDFKFSLRSKFDNMEILEENSKKAINELLDFLKKNFEVATEQDIQNEIYKISRENNIE
CCCCCEEHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PALFFKQIYKILIDKEKGPKLAGFIKIIGIDRFEKITSKYV
HHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA