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The map label for this gene is rpiA [H]

Identifier: 15595002

GI number: 15595002

Start: 696751

End: 697437

Strand: Reverse

Name: rpiA [H]

Synonym: BB0657

Alternate gene names: 15595002

Gene position: 697437-696751 (Counterclockwise)

Preceding gene: 15595004

Following gene: 15595000

Centisome position: 76.58

GC content: 29.4

Gene sequence:

>687_bases
ATGGAAAATCAAAAAATTTTGGTAGCAAAACATGCAATTGATCACTATATCAAAAGCAATATGAACCTTGGAATCGGAAC
AGGTACAACTATTTATTATGCAATAAAATATCTAAGCGAAAAGATAAAATCGGGTAGCTTAAAAAATTTAAAATTCTACA
CAACAAGTAGTGATACAAAATATTTACTCTCAAAAGAACAAATTCCTTATGAATCAAATTTTTCAAAACTTAATAAAAAT
CTAGACATTGCAATTGATGGAGCTGATGAAATTTTATTAGAAAAAAAAAGCTTAATAAAGGGAATGGGGGGTGCTCATCT
AATGGAGAAAGTAATAGCCTACAATTCAGAAACATTGCTAATAATAGCAGATGAAACCAAAATTGTTAAAAAATTAGGAA
CAAAAATGCCTATTCCCATAGAAGTTGCCCAAAATGCTGTTGGATTTATTATGACTAGACTTGAAGAAATGAATTTAGAG
GCAACCTTGAGAATTTGTAAAGAAAAGAAAGGCCCCACTATAACTGATAACAATAATTATATCTTAGATGTAAAAATGCA
TGTGGAAAATCCTGAAGGAACAGAAAAATACTTCAAACTATTTCCAGGTATACTTGAGATTGGAATATTCAACCATAAAA
ACACAAGAATAGTTTATTACCAAGACAAACAAATCAAGGAAGCCTAA

Upstream 100 bases:

>100_bases
TTAGCATAAAATCTAGTCAAGATTTAAACCTTAGTAATTAAATAATGATATACTTTAAAATACATTAAGCTTTAAGTTTA
TCAAGCAAGGAAAAGAATTT

Downstream 100 bases:

>100_bases
GCTTAACTTTAAAAAAGTTATCATTAAAATGGTTTATAATTTTTACTAAATAAAAATTTAACTTAAACCTTTCTCTCCCT
TTTAATAGCATAATATTATC

Product: ribose 5-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MENQKILVAKHAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTKYLLSKEQIPYESNFSKLNKN
LDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLIIADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEEMNLE
ATLRICKEKKGPTITDNNNYILDVKMHVENPEGTEKYFKLFPGILEIGIFNHKNTRIVYYQDKQIKEA

Sequences:

>Translated_228_residues
MENQKILVAKHAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTKYLLSKEQIPYESNFSKLNKN
LDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLIIADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEEMNLE
ATLRICKEKKGPTITDNNNYILDVKMHVENPEGTEKYFKLFPGILEIGIFNHKNTRIVYYQDKQIKEA
>Mature_228_residues
MENQKILVAKHAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTKYLLSKEQIPYESNFSKLNKN
LDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLIIADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEEMNLE
ATLRICKEKKGPTITDNNNYILDVKMHVENPEGTEKYFKLFPGILEIGIFNHKNTRIVYYQDKQIKEA

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=231, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=1e-24,
Organism=Escherichia coli, GI1789280, Length=205, Percent_Identity=30.2439024390244, Blast_Score=79, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17551758, Length=236, Percent_Identity=32.2033898305085, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324669, Length=238, Percent_Identity=30.2521008403361, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281364072, Length=209, Percent_Identity=37.3205741626794, Blast_Score=118, Evalue=3e-27,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 25886; Mature: 25886

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQKILVAKHAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTK
CCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCE
YLLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLL
EEEECCCCCCCCCHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEE
IIADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEEMNLEATLRICKEKKGPTITDNNNY
EEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCE
ILDVKMHVENPEGTEKYFKLFPGILEIGIFNHKNTRIVYYQDKQIKEA
EEEEEEEECCCCCHHHHHHHCCHHHEEEEEECCCCEEEEEECCCCCCC
>Mature Secondary Structure
MENQKILVAKHAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTK
CCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCE
YLLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLL
EEEECCCCCCCCCHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEE
IIADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEEMNLEATLRICKEKKGPTITDNNNY
EEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCE
ILDVKMHVENPEGTEKYFKLFPGILEIGIFNHKNTRIVYYQDKQIKEA
EEEEEEEECCCCCHHHHHHHCCHHHEEEEEECCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA